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IVF0023328 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023328
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:12643172..12643339
RNA-Seq ExpressionIVF0023328
SyntenyIVF0023328
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]8.54e-2885.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+++DDVDEGDSAY TTTA+EDI+YIETTNEWSQW DELAES+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
KAA0058532.1 retrotransposon protein [Cucumis melo var. makuwa]1.78e-2585.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+NVDD+DEGDS YTTTTA+EDI+YIETTNEWSQW DEL ES+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
KAA0066980.1 retrotransposon protein [Cucumis melo var. makuwa]2.82e-32100Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
TYK07212.1 retrotransposon protein [Cucumis melo var. makuwa]6.42e-2685.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+NVDD+DEGDS YTTTTA+EDI+YIETTNEWSQW DEL ES+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
TYK30996.1 retrotransposon protein [Cucumis melo var. makuwa]2.22e-2585.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+NVDDVDE DS Y TTTA+EDI YIETTNEWSQWHDELA+S+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7URP2 Retrotransposon protein7.1e-2085.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+NVDD+DEGDS YTTTTA+EDI+YIETTNEWSQW DEL ES+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
A0A5A7VIF1 Retrotransposon protein4.7e-24100Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
A0A5D3BDZ0 Retrotransposon protein7.1e-2085.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+++DDVDEGDSAY TTTA+EDI+YIETTNEWSQW DELAES+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
A0A5D3C7D1 Retrotransposon protein7.1e-2085.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+NVDD+DEGDS YTTTTA+EDI+YIETTNEWSQW DEL ES+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
A0A5D3E5R9 Retrotransposon protein4.6e-1985.45Show/hide
Query:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
        MTYC+NVDDVDE DS Y TTTA+EDI YIETTNEWSQWHDELA+S+FTDWQLRNA
Subjt:  MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCAATAATGTTGACGACGTGGACGAGGGGGACTCCGCGTACACGACGACCACCGCTACAGAAGACATTTACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGCACGACGAACTAGCTGAATCGATATTCACAGATTGGCAGTTACGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCAATAATGTTGACGACGTGGACGAGGGGGACTCCGCGTACACGACGACCACCGCTACAGAAGACATTTACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGCACGACGAACTAGCTGAATCGATATTCACAGATTGGCAGTTACGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCNNVDDVDEGDSAYTTTTATEDIYYIETTNEWSQWHDELAESIFTDWQLRNA