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IVF0023329 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023329
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description3'-5' exonuclease domain-containing protein
Genome locationchr02:14992298..14993036
RNA-Seq ExpressionIVF0023329
SyntenyIVF0023329
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032198.1 Werner Syndrome-like exonuclease [Cucumis melo var. makuwa]1.78e-1273.81Show/hide
Query:  LEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        +EDDTF F+GVGI+ND+LK Y+DYDLNVAN +DLRELA DE+
Subjt:  LEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

KAE8651170.1 hypothetical protein Csa_000755 [Cucumis sativus]2.40e-2184.48Show/hide
Query:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        F  I  SE PQSLI+FLEDDTFTFVGVGIDNDVLK Y+DYDLNVANTVDLRELAADE+
Subjt:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

XP_004136771.1 Werner Syndrome-like exonuclease [Cucumis sativus]1.68e-2184.48Show/hide
Query:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        F  I  SE PQSLI+FLEDDTFTFVGVGIDNDVLK Y+DYDLNVANTVDLRELAADE+
Subjt:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

XP_023876352.1 Werner Syndrome-like exonuclease [Quercus suber]8.68e-1345Show/hide
Query:  SSPSSLLALPWLTCGSPKSSIFTVLDSTISSLVLTLSGVLAPIVIFVTSSPLYNSVSVATASFSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYS
        S PSS     W T GSP S+  T   ST SS   T SG   P+      + L   V      F  I  +  P SLI FL D+ FTFVGVGI++DV K   
Subjt:  SSPSSLLALPWLTCGSPKSSIFTVLDSTISSLVLTLSGVLAPIVIFVTSSPLYNSVSVATASFSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYS

Query:  DYDLNVANTVDLRELAADEI
        DYDL V N VDLR LA D +
Subjt:  DYDLNVANTVDLRELAADEI

XP_038906336.1 Werner Syndrome-like exonuclease [Benincasa hispida]8.31e-1875.86Show/hide
Query:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        F  I  SEIP+SLI+FLEDDTFTFVGVGID DV + Y+DYDL VANTVDLRELAA+E+
Subjt:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

TrEMBL top hitse value%identityAlignment
A0A0A0LHC5 3'-5' exonuclease domain-containing protein6.2e-1784.48Show/hide
Query:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        F  I  SE PQSLI+FLEDDTFTFVGVGIDNDVLK Y+DYDLNVANTVDLRELAADE+
Subjt:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

A0A5A7SNJ2 Werner Syndrome-like exonuclease4.7e-0973.81Show/hide
Query:  LEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        +EDDTF F+GVGI+ND+LK Y+DYDLNVAN +DLRELA DE+
Subjt:  LEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

A0A5B7BMQ8 Putative Werner Syndrome-like exonuclease1.8e-0862.07Show/hide
Query:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        F  I   EIPQSL +FL D+ +TFVGVGID DV K Y DY L+V+NTVDL  LAA E+
Subjt:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

A0A5D3DF32 Werner Syndrome-like exonuclease3.6e-0976.19Show/hide
Query:  LEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI
        +EDDTF F+GVGI+ND+LK Y+DYDLNVAN VDLRELA DE+
Subjt:  LEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEI

A0A6J1D121 Werner Syndrome-like exonuclease1.8e-0860.71Show/hide
Query:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAAD
        F  I   EIP SL++FL D+TFTFVGVGID D  K + DYDL V N VDLR +A D
Subjt:  FSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAAD

SwissProt top hitse value%identityAlignment
Q84LH3 Werner Syndrome-like exonuclease1.8e-0543.1Show/hide
Query:  NICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEICG
        +I  S IPQSL + +ED T   VG+GID D +K + DY +++ +  DL +LA  +I G
Subjt:  NICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEICG

Arabidopsis top hitse value%identityAlignment
AT4G13870.1 Werner syndrome-like exonuclease1.3e-0643.1Show/hide
Query:  NICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEICG
        +I  S IPQSL + +ED T   VG+GID D +K + DY +++ +  DL +LA  +I G
Subjt:  NICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEICG

AT4G13870.2 Werner syndrome-like exonuclease1.3e-0643.1Show/hide
Query:  NICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEICG
        +I  S IPQSL + +ED T   VG+GID D +K + DY +++ +  DL +LA  +I G
Subjt:  NICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEICG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTTCTTTTTTCCTCTCGTTCCTTCTTTTTTTCGTTCCTTCTTCTTTCCTCCTTTTTTCGTCCTCTTCGCCCCCTTTCTCTTCTTCAATCTCTTCATCAATCTCT
TCATCGCCTTCTTTCCTTTCTAACCTTCAATCTTTTACCTTCGACGATGAAATCCTCACCCTCCTCACTACTTGCCCTTCCATGGTTGACATGTGGATCTCCGAAATCCT
CTATATTTACCGTCTTAGACTCCACCATCTCGTCGTTGGTCTTAACATTGAGTGGCGTCCTAGCTCCGATCGTCATTTTCGTAACCTCGTCACCACTTTACAACTCTGTG
TCGGTCGCTACTGCCTCATTTTCCAACATCTGCAGATCTGAAATTCCTCAGTCTTTGATCAATTTCTTAGAGGACGATACCTTCACTTTCGTTGGTGTTGGAATCGACAA
TGACGTTCTGAAGCACTATAGTGATTACGACCTAAATGTTGCTAACACCGTTGATCTTAGGGAGTTGGCTGCGGATGAGATATGTGGATGA
mRNA sequenceShow/hide mRNA sequence
CTTTTTTTTCCTTATGTTCCTTCTTTTTTCCTCTCGTTCCTTCTTTTTTTCGTTCCTTCTTCTTTCCTCCTTTTTTCGTCCTCTTCGCCCCCTTTCTCTTCTTCAATCTC
TTCATCAATCTCTTCATCGCCTTCTTTCCTTTCTAACCTTCAATCTTTTACCTTCGACGATGAAATCCTCACCCTCCTCACTACTTGCCCTTCCATGGTTGACATGTGGA
TCTCCGAAATCCTCTATATTTACCGTCTTAGACTCCACCATCTCGTCGTTGGTCTTAACATTGAGTGGCGTCCTAGCTCCGATCGTCATTTTCGTAACCTCGTCACCACT
TTACAACTCTGTGTCGGTCGCTACTGCCTCATTTTCCAACATCTGCAGATCTGAAATTCCTCAGTCTTTGATCAATTTCTTAGAGGACGATACCTTCACTTTCGTTGGTG
TTGGAATCGACAATGACGTTCTGAAGCACTATAGTGATTACGACCTAAATGTTGCTAACACCGTTGATCTTAGGGAGTTGGCTGCGGATGAGATATGTGGATGAGATGCA
GAGTGATGAGTTGAGGACTGTCGGACTGAAGACTTTGGAGAGAGAGGTTCTTGGGAGGGAGAATGGTAAAATCTTTCTAGGGATTTTGATTTTGGTTGTGAAAATATTTC
TAGGGTTTGGTTTTCTTTCCATGGGTTCTATATAGGATAGCAAACGGAATATTATATATGTTAATAACTGTTCTTCCAG
Protein sequenceShow/hide protein sequence
MFLLFSSRSFFFSFLLLSSFFRPLRPLSLLQSLHQSLHRLLSFLTFNLLPSTMKSSPSSLLALPWLTCGSPKSSIFTVLDSTISSLVLTLSGVLAPIVIFVTSSPLYNSV
SVATASFSNICRSEIPQSLINFLEDDTFTFVGVGIDNDVLKHYSDYDLNVANTVDLRELAADEICG