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IVF0023331 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023331
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAuxin response factor
Genome locationchr04:6434270..6434658
RNA-Seq ExpressionIVF0023331
SyntenyIVF0023331
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044835 - Auxin response factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032718.1 auxin response factor 18 isoform X2 [Cucumis melo var. makuwa]1.14e-5198.8Show/hide
Query:  MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILR 
Subjt:  MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

XP_004139643.1 auxin response factor 18 isoform X1 [Cucumis sativus]2.02e-3585Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQS DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQELAAKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

XP_011659155.1 auxin response factor 18 isoform X2 [Cucumis sativus]1.98e-3585Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQS DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQELAAKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

XP_022159157.1 auxin response factor 18-like [Momordica charantia]9.52e-3583.75Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQS DPEPPE TR++VH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQELAAKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

XP_038898458.1 auxin response factor 18-like [Benincasa hispida]9.92e-3583.75Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQS DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQEL AKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

TrEMBL top hitse value%identityAlignment
A0A0A0K887 Auxin response factor4.8e-3085Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQS DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQELAAKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

A0A5A7SQA0 Auxin response factor 18 isoform X21.7e-40100Show/hide
Query:  MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILR
        MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILR
Subjt:  MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILR

A0A5A7U902 Auxin response factor9.0e-2982.5Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQ+ DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LP  D+ QSTPTQELAAKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

A0A5D3C9C4 Auxin response factor9.0e-2982.5Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQ+ DPEPPE TR+TVH F  ILTASDTSTHGGFSVLRKHATE LP  D+ QSTPTQELAAKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

A0A6J1DZ17 Auxin response factor1.8e-2983.75Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEPQS DPEPPE TR++VH F  ILTASDTSTHGGFSVLRKHATE LPP D+ QSTPTQELAAKDLHGYE KFKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

SwissProt top hitse value%identityAlignment
Q5NB85 Auxin response factor 13.0e-2164.94Show/hide
Query:  PQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        P   DP  PE  R  VH F  ILT SDTSTHGGFSVLR+HA E LPP D+  +TPTQEL  KDLHG E +FKHI RG
Subjt:  PQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

Q6YVY0 Auxin response factor 74.3e-2061.25Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        Q+E  S  PEP E  +  VH F   LTASDTSTHGGFSVLR+HA E LPP D+ Q+ P QEL A+DLHG E  F+HI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

Q9C5W9 Auxin response factor 182.4e-2366.25Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEP S DP     T++  H F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q+TPTQEL  +DLHG+E +FKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

Q9XED8 Auxin response factor 96.2e-2771.79Show/hide
Query:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        EP S DP PPE  R  VH F  +LTASDTSTHGGFSVLRKHATE LPP D+ Q TPTQEL A+D+HGY+ KFKHI RG
Subjt:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

Q9ZPY6 Auxin response factor 112.9e-2470Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEP S DP   E  + TV  F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q TPTQEL A+DLHGYE +FKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

Arabidopsis top hitse value%identityAlignment
AT2G46530.1 auxin response factor 112.0e-2570Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEP S DP   E  + TV  F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q TPTQEL A+DLHGYE +FKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

AT2G46530.2 auxin response factor 111.7e-2469.23Show/hide
Query:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        EP S DP   E  + TV  F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q TPTQEL A+DLHGYE +FKHI RG
Subjt:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

AT2G46530.3 auxin response factor 112.0e-2570Show/hide
Query:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        QSEP S DP   E  + TV  F  ILTASDTSTHGGFSVLRKHATE LP  D+ Q TPTQEL A+DLHGYE +FKHI RG
Subjt:  QSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

AT4G23980.1 auxin response factor 94.4e-2871.79Show/hide
Query:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        EP S DP PPE  R  VH F  +LTASDTSTHGGFSVLRKHATE LPP D+ Q TPTQEL A+D+HGY+ KFKHI RG
Subjt:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG

AT4G23980.2 auxin response factor 94.4e-2871.79Show/hide
Query:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG
        EP S DP PPE  R  VH F  +LTASDTSTHGGFSVLRKHATE LPP D+ Q TPTQEL A+D+HGY+ KFKHI RG
Subjt:  EPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTGCAAAGTGAGCCCCAAAGCACTGATCCAGAGCCACCTGAGTGTACAAGGAAAACTGTTCATTGTTTTTATATGATTTTGACTGCTTCTGATACTAGCACTCA
TGGAGGTTTCTCAGTTCTTAGAAAGCATGCCACTGAAAGTCTTCCTCCCTTTGATATAATTCAATCCACCCCAACTCAGGAGTTAGCTGCCAAGGATCTTCATGGTTACG
AGCCAAAATTTAAGCATATTCTCAGGGGTACTTACTTCATTTTAAGTTATTTTAAGTATGTACATTCTTTAACTATTAACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACTGCAAAGTGAGCCCCAAAGCACTGATCCAGAGCCACCTGAGTGTACAAGGAAAACTGTTCATTGTTTTTATATGATTTTGACTGCTTCTGATACTAGCACTCA
TGGAGGTTTCTCAGTTCTTAGAAAGCATGCCACTGAAAGTCTTCCTCCCTTTGATATAATTCAATCCACCCCAACTCAGGAGTTAGCTGCCAAGGATCTTCATGGTTACG
AGCCAAAATTTAAGCATATTCTCAGGGGTACTTACTTCATTTTAAGTTATTTTAAGTATGTACATTCTTTAACTATTAACTTCTAG
Protein sequenceShow/hide protein sequence
MRLQSEPQSTDPEPPECTRKTVHCFYMILTASDTSTHGGFSVLRKHATESLPPFDIIQSTPTQELAAKDLHGYEPKFKHILRGTYFILSYFKYVHSLTINF