| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043826.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0 | 95.49 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHG
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHG
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHG
Query: ELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHMMLVFTGNNLKKKQLSNEFEMKNLGELKRILGMDVKRD
ELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHMMLVFTGNNLKK + S ELKRILGMDVKRD
Subjt: ELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHMMLVFTGNNLKKKQLSNEFEMKNLGELKRILGMDVKRD
Query: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLL
KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLL
Subjt: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLL
Query: EGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKV
EGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKV
Subjt: EGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKV
Query: HTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNIQRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIP
HTVENLSDMLTKALSAHR TPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIP
Subjt: HTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNIQRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIP
Query: VDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFFVG
VDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFFVG
Subjt: VDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFFVG
|
|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 0.0 | 89.4 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSK LEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVT+MSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKH TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSS-----IRLILSIAVHFDMFIEQMDVTT
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP +S RLILSIAVHFDMFIEQMDVTT
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSS-----IRLILSIAVHFDMFIEQMDVTT
Query: TFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG-----------------STETHMMLV----------FT
TFLHGELEEVIYMAQPKGYEVKGKEDMVCR LHKSLYGLKQSPRQWYI FDTFILKQG T +++L +
Subjt: TFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG-----------------STETHMMLV----------FT
Query: GNNLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMY
G KKQLSNEFEMK+LGELKRILGMDVKRD+EKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMY
Subjt: GNNLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMY
Query: LMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LL
LMICTRPDLGYAMS SASVSLCYSRDCDKSTLLEGFTDADYAADLDKR L L
Subjt: LMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LL
Query: CRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
+EYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Subjt: CRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
|
|
| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0 | 88.42 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP---------------------------------
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP---------------------------------
Query: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCR LHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
Query: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
T++ L+ +++ KKQLSNEFEMK+LGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Subjt: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Query: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDK
SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS SASVSLCYSRDCDKSTLLEGFTDADYAADLDK
Subjt: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDK
Query: RSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
R L L +EYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Subjt: RSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Query: KDVELVKVHTVENLSDMLTKALSAHR
KDVELVKVHTVENLSDMLTKALSAHR
Subjt: KDVELVKVHTVENLSDMLTKALSAHR
|
|
| TYK13826.1 putative polyprotein [Cucumis melo var. makuwa] | 0.0 | 87.74 | Show/hide |
Query: MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAET
MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAET
Subjt: MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAET
Query: GYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCT
GYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCT
Subjt: GYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCT
Query: IKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
IKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Subjt: IKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Query: KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHF
KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHF
Subjt: KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHF
Query: TVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIF
TVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+F
Subjt: TVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIF
Query: IGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
IGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Subjt: IGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Query: AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSK
AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSK
Subjt: AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSK
Query: WIYKIKP---------------------------------VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDM
WIYKIKP VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCR
Subjt: WIYKIKP---------------------------------VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDM
Query: VCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------------STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRD
LHKSLYGLKQSPRQWYIRFDTFILKQG T++ L+ +++ KKQLSNEFEMK+LGELKRILGMDVKRD
Subjt: VCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------------STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRD
Query: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS------------------
KEKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS
Subjt: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS------------------
Query: --------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEF
SASVSLCYSRDCDKSTLLEGFTDADYAADLDKR L L +EYISLGEAVKEAVWLKRIVGELLSQEF
Subjt: --------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEF
Query: IPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
IPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Subjt: IPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
|
|
| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0 | 93.39 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP---------------------------------
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP---------------------------------
Query: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKEDMVCR LHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
Query: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
T++ L+ +++ KKQLSNEFEMK+LGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Subjt: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Query: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWL
SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWL
Subjt: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWL
Query: KRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNI
KRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNI
Subjt: KRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNI
Query: QRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIPVDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFF
QRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIPVDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFF
Subjt: QRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIPVDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFF
Query: VG
VG
Subjt: VG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TP18 Putative gag-pol polyprotein | 0.0e+00 | 95.49 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEIT+GYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHG
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHG
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHG
Query: ELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHMMLVFTGNNLKKKQLSNEFEMKNLGELKRILGMDVKRD
ELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHMMLVFTGNNLKK + S ELKRILGMDVKRD
Subjt: ELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHMMLVFTGNNLKKKQLSNEFEMKNLGELKRILGMDVKRD
Query: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLL
KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLL
Subjt: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLL
Query: EGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKV
EGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKV
Subjt: EGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKV
Query: HTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNIQRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIP
HTVENLSDMLTKALSAH RTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIP
Subjt: HTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNIQRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIP
Query: VDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFFVG
VDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFFVG
Subjt: VDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFFVG
|
|
| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 0.0e+00 | 88.6 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSK LEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVT+MSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKH TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSS-----IRLILSIAVHFDMFIEQMDVTT
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP +S RLILSIAVHFDMFIEQMDVTT
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSS-----IRLILSIAVHFDMFIEQMDVTT
Query: TFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG-----------------STETHMMLV----------FT
TFLHGELEEVIYMAQPKGYEVKGKE DMVCRLHKSLYGLKQSPRQWYI FDTFILKQG T +++L +
Subjt: TFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG-----------------STETHMMLV----------FT
Query: GNNLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMY
G KKQLSNEFEMK+LGELKRILGMDVKRD+EKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMY
Subjt: GNNLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMY
Query: LMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LL
LMICTRPDLGYAMS SASVSLCYSRDCDKSTLLEGFTDADYAADLDKR L L
Subjt: LMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LL
Query: CRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRS-
+EYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Subjt: CRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRS-
Query: -TRKEQKEEDKKKR-GAAV
T K +K K R GAAV
Subjt: -TRKEQKEEDKKKR-GAAV
|
|
| A0A5A7UB25 Putative gag-pol polyprotein | 0.0e+00 | 88.42 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK---------------------------------P
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK P
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK---------------------------------P
Query: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKE DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
Query: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
T++ L+ +++ KKQLSNEFEMK+LGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Subjt: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Query: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDK
SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS SASVSLCYSRDCDKSTLLEGFTDADYAADLDK
Subjt: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDK
Query: RSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
R L L +EYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Subjt: RSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQ
Query: KDVELVKVHTVENLSDMLTKALSAHR
KDVELVKVHTVENLSDMLTKALSAHR
Subjt: KDVELVKVHTVENLSDMLTKALSAHR
|
|
| A0A5D3CTV2 Putative polyprotein | 0.0e+00 | 87.74 | Show/hide |
Query: MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAET
MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAET
Subjt: MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAET
Query: GYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCT
GYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCT
Subjt: GYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCT
Query: IKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
IKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Subjt: IKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Query: KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHF
KH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHF
Subjt: KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHF
Query: TVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIF
TVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+F
Subjt: TVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIF
Query: IGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
IGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Subjt: IGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG
Query: AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSK
AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSK
Subjt: AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSK
Query: WIYKIK---------------------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDM
WIYKIK PVVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKE DM
Subjt: WIYKIK---------------------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDM
Query: VCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------------STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRD
VCRLHKSLYGLKQSPRQWYIRFDTFILKQG T++ L+ +++ KKQLSNEFEMK+LGELKRILGMDVKRD
Subjt: VCRLHKSLYGLKQSPRQWYIRFDTFILKQG---------------STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRD
Query: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS------------------
KEKGLLTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS
Subjt: KEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS------------------
Query: --------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEF
SASVSLCYSRDCDKSTLLEGFTDADYAADLDKR L L +EYISLGEAVKEAVWLKRIVGELLSQEF
Subjt: --------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEF
Query: IPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
IPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Subjt: IPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
|
|
| A0A5D3DNU1 Putative gag-pol polyprotein | 0.0e+00 | 93.39 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKE
Query: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Subjt: RSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQ
Query: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV YVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Subjt: KVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI
Query: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKH TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Subjt: ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRK
Query: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Subjt: VWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEA
Query: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Subjt: AQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Query: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Subjt: EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAY
Query: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK---------------------------------P
ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK P
Subjt: ALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK---------------------------------P
Query: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEVIYMAQPKGYEVKGKE DMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: VVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQG----------
Query: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
T++ L+ +++ KKQLSNEFEMK+LGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Subjt: -----STETHMMLVFTGNNL------------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLS
Query: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWL
SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWL
Subjt: SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQLLLCRLRTEYISLGEAVKEAVWL
Query: KRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNI
KRIVGELLSQEFIPIIHCDSQ+AIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNI
Subjt: KRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQKEEDKKKRGAAVFGNI
Query: QRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIPVDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFF
QRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIPVDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFF
Subjt: QRERESGGEELRRERESDGGRTPAACGVFFPDNRSVFTATARATSVFLLGFPLGLFGFIPVDSVGLTTWANSGLFSIGFWVYSYGQRWSVSGGRRSASFF
Query: VG
VG
Subjt: VG
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-118 | 27.2 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK-YGRDSLTMSIVLDALKTRNLEIKKERKD--GELLMARGRSEKKSWK
+ SL + F +++ +L G K+ + ++ LL +LP Y + AI+ ++LT++ V + L + ++IK + D +++ A + ++K
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK-YGRDSLTMSIVLDALKTRNLEIKKERKD--GELLMARGRSEKKSWK
Query: G---KERSFRSKS--KGKSR---KCFLCHKEGHFKKNC-----PLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQD--AWIMD
K R + K KG S+ KC C +EGH KK+C LN + + + + A + V V++ + D +++D
Subjt: G---KERSFRSKS--KGKSR---KCFLCHKEGHFKKNC-----PLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQD--AWIMD
Query: SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRI-------LTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSL
SG + H+ T+ +V + V G AT G+VR+ L +VL+ + NL+S+ L +G +I+ + + ++K L
Subjt: SGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRI-------LTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSL
Query: VKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNVEL--PFCEHCIMGKSTRVKFG--KGKHITKGIL
+ +K + G+ + ++ A + K + LWH+R H+S+ L + ++ + + N+EL CE C+ GK R+ F K K K L
Subjt: VKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNVEL--PFCEHCIMGKSTRVKFG--KGKHITKGIL
Query: DYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQ
VHSD+ GP V++ YF+ +D F+ Y +K K + F F ++ + E KV YL DNG E+++N+ QFC +GI+ H TV +TPQ
Subjt: DYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQ
Query: NGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTAL--NLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKD--GKLNKRALKCIFIGYP
NG++ER RTI E+ R +++ A L FWGEA TA YLINR PS AL + KTP E+W K P L+HLRVFG T Y H+K+ GK + ++ K IF+GY
Subjt: NGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTAL--NLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKD--GKLNKRALKCIFIGYP
Query: QGVKGYKLWCIEKGMNKCIISRDVTFNETEM---------PYCVKEQQKQQTGDHVVTEVRIASEVRP--SIDLDNQPPLVSEIEDTQQSEFDGIQSQQE
G+KLW + K I++RDV +ET M +K+ ++ + + +I P S + DN + ++D+++SE +
Subjt: QGVKGYKLWCIEKGMNKCIISRDVTFNETEM---------PYCVKEQQKQQTGDHVVTEVRIASEVRP--SIDLDNQPPLVSEIEDTQQSEFDGIQSQQE
Query: RIL----------IDEGAFIEESSSNNDL----------------------------------------------QNYQLTRDRVQRERHAP-IRYGYAD
+I+ D F+++S +N ++ R +R + P I Y D
Subjt: RIL----------IDEGAFIEESSSNNDL----------------------------------------------QNYQLTRDRVQRERHAP-IRYGYAD
Query: LVAYALTCAADSIEAE-PLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-----------------------------
+ A +I + P +F+E D K W++A+ EL + N TW++ +P N+ ++ S+W++ +K
Subjt: LVAYALTCAADSIEAE-PLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK-----------------------------
Query: ---PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFD-------------
PV R SS R ILS+ + +++ + QMDV T FL+G L+E IYM P+G D VC+L+K++YGLKQ+ R W+ F+
Subjt: ---PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFD-------------
Query: ---TFILKQGSTETHM--------MLVFTGN----NLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLAS
+IL +G+ ++ +++ TG+ N K+ L +F M +L E+K +G+ ++ ++K + +SQ +YV K+L K+NM + AVSTPL S
Subjt: ---TFILKQGSTETHM--------MLVFTGN----NLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLAS
Query: --HFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPD--------------------------LGYAMSSASVSLCYSRDCDKSTLLEGFTDAD
++ L +S E N P + +G +MY+M+CTRPD L Y + + L + ++ + G+ D+D
Subjt: --HFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPD--------------------------LGYAMSSASVSLCYSRDCDKSTLLEGFTDAD
Query: YA-ADLDKRSQL----------LLC------------RLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPI-IHCDSQNAIHLAKNPSHHERSKHIDVKF
+A +++D++S L+C EY++L EAV+EA+WLK ++ + + PI I+ D+Q I +A NPS H+R+KHID+K+
Subjt: YA-ADLDKRSQL----------LLC------------RLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPI-IHCDSQNAIHLAKNPSHHERSKHIDVKF
Query: HYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQK
H+ R + + L + T L+D+ TK L A R K
Subjt: HYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRSTRKEQK
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-205 | 36.44 | Show/hide |
Query: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLM--ARGRSEKKSWKG
M + + +L+ F ++ L N+G K+ +E++A++LLNSLP +Y + I +G+ ++ + V AL KK G+ L+ RGRS ++S
Subjt: MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLM--ARGRSEKKSWKG
Query: KERS-----FRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHR
RS +++SK + R C+ C++ GHFK++CP + + TS D N+A + D+ E M + W++D+ + H TP R
Subjt: KERS-----FRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHR
Query: DFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTT
D + D G V +G+ + G G + I T+ G +L +V +VP L+ NLIS LDR G N ++TKGSLV KG R LY
Subjt: DFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTT
Query: VSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISI
G A +++ LWHKR+ H+SE+GLQ L+++ L+ K + C++C+ GK RV F ILD V+SD+ GP + SMGG++YF++
Subjt: VSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSMGGSRYFISI
Query: IDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLP
IDD SRK+W+Y LK KD+ F F ++ VE +TGRK+K LR+DNG E+ + +F ++C S GI TV TPQ NG+AER NRTI+E+ R +L A LP
Subjt: IDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLP
Query: LKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHV---KDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTF
FWGEA QTACYLINRSPS L + P+ VWT K S HL+VFGC A+AHV + KL+ +++ CIFIGY GY+LW + K I SRDV F
Subjt: LKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHV---KDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTF
Query: NETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPI
E+E+ +K + G + V I S ++ VSE Q E G +Q L DEG E + + Q+ L R +R R
Subjt: NETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDRVQRERHAPI
Query: RYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK------------------------
RY + V S + EP + +E + K Q AM+EE+ SL KN T+ LV P ++ ++ KW++K+K
Subjt: RYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK------------------------
Query: --------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGS
PVV+ +SIR ILS+A D+ +EQ+DV T FLHG+LEE IYM QP+G+EV GK + MVC+L+KSLYGLKQ+PRQWY++FD+F+ Q
Subjt: --------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGS
Query: TETH----------------MMLVFTGNNL-----------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVST
+T+ ++L++ + L K LS F+MK+LG ++ILGM + R++ L +SQE Y+ ++LE++NM ++K VST
Subjt: TETH----------------MMLVFTGNNL-----------KKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVST
Query: PLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSAS---------------VSLCYSR----DC----DKSTLLEGFTDADY
PLA H +LS CP T +E+ M+ +PY +AVGS+MY M+CTRPD+ +A+ S L Y R DC +L+G+TDAD
Subjt: PLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSAS---------------VSLCYSR----DC----DKSTLLEGFTDADY
Query: AADLDKRSQ----------------------LLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYI
A D+D R + L EYI+ E KE +WLKR + EL + +++CDSQ+AI L+KN +H R+KHIDV++H+I
Subjt: AADLDKRSQ----------------------LLLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYI
Query: RNVIAQKDVELVKVHTVENLSDMLTKALSAHR
R ++ + ++++K+ T EN +DMLTK + ++
Subjt: RNVIAQKDVELVKVHTVENLSDMLTKALSAHR
|
|
| Q12113 Transposon Ty2-OR1 Gag-Pol polyprotein | 3.2e-24 | 21.51 | Show/hide |
Query: SHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKV
S+ ++ D ++DSG + + +L + ++ + G++ +G + L+ P + +L+SL EL T ++
Subjt: SHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGELDRSGCTIKSENGVMKV
Query: TKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM----------LWHKRLAHVSERGLQALSQQGLLGGVKNVELPF-------CEHCIMGKST
+ G++ L ++HG + + I+ + +++ L H+ L H + R +Q ++ + +K ++ + C C++GKST
Subjt: TKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM----------LWHKRLAHVSERGLQALSQQGLLGGVKNVELPF-------CEHCIMGKST
Query: RVKFGKGKHI----TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPL--KQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKF
+ + KG + + Y+H+D++GP + YFIS D+ +R W+YPL ++++ F ++NQ +V ++ D G E+ N
Subjt: RVKFGKGKHI----TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPL--KQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKF
Query: NQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYA--H
++F + GIT +T T + +G+AER NRT++ R LL + LP W A + + +I S + N K+ ++ + + FG H
Subjt: NQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYA--H
Query: VKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEF
D K+ +P+G+ GY L I + Y + Q KQ D + + + NQ + E +T+QS
Subjt: VKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEF
Query: DGIQSQ---QERILIDEGAFIEESSSNNDLQNYQLTRDRVQRER
+S Q I I+ + + SS + L QL ++ VQ+ R
Subjt: DGIQSQ---QERILIDEGAFIEESSSNNDLQNYQLTRDRVQRER
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.0e-91 | 26 | Show/hide |
Query: IGEKMSDENQAVILLNSLPETYREV--KAAIKYGRDSLT---------------------MSIVLDALKTRNLEIKKERKDG----ELLMARGRSEKKSW
+G+ M + Q +L +LPE Y+ V + A K +LT + I +A+ RN +G + K W
Subjt: IGEKMSDENQAVILLNSLPETYREV--KAAIKYGRDSLT---------------------MSIVLDALKTRNLEIKKERKDG----ELLMARGRSEKKSW
Query: KGKERSF---RSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHR
+ +F ++SK KC +C +GH K C + + NS + + T ++ L + + W++DSG T H+T
Subjt: KGKERSF---RSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHR
Query: DFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGEL-DRSGCTIK--SENGVMKVTKGSLVKLKGTLRHGLY--
+ L+ Q GG V++ D T + TGS ++T + L N+LYVP + +NLIS+ L + +G +++ + +K + L+G + LY
Subjt: DFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGEL-DRSGCTIK--SENGVMKVTKGSLVKLKGTLRHGLY--
Query: -VLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPF--CEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSM
+ VS A+ S K T S WH RL H + L ++ L V N F C C++ KS +V F + + L+Y++SD+W + +S
Subjt: -VLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPF--CEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPTKEVSM
Query: GGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTR
RY++ +D F+R W+YPLKQK + F+ +K +EN+ ++ +DNG EFV ++ GI+ + +TP+ NGL+ER +R I+E
Subjt: GGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTR
Query: CLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVK---DGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNK
LL++AS+P +W A A YLINR P+ L L++P + G +P+ + LRVFGC Y ++ KL+ ++ +C+F+GY Y C+ ++
Subjt: CLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVK---DGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNK
Query: CIISRDVTFNETEMPYC--------VKEQQKQQT---GDHVVTEVR---------------IASEVRPSIDLDNQPPLVSEIEDTQQSEF----------
ISR V F+E P+ V+EQ+++ + H R PS N S ++ + S F
Subjt: CIISRDVTFNETEMPYC--------VKEQQKQQT---GDHVVTEVR---------------IASEVRPSIDLDNQPPLVSEIEDTQQSEF----------
Query: -DGIQSQQERILIDEGAFIEESSSNNDLQN---YQLTRDR----------------------------------------VQRERHAPIR------YGYA
+G Q + +++S N+ N QL + V AP+ A
Subjt: -DGIQSQQERILIDEGAFIEESSSNNDLQN---YQLTRDR----------------------------------------VQRERHAPIR------YGYA
Query: DLV----AYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIK------------------------
++ Y+L + + E+EP T AI + ++W++AM E+ + N TW LVP PP+ ++ +WI+ K
Subjt: DLV----AYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIK------------------------
Query: --------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRF---------
PV++ +SIR++L +AV I Q+DV FL G L + +YM+QP G+ K + + VC+L K+LYGLKQ+PR WY+
Subjt: --------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRF---------
Query: -----DT--FILKQGSTETHMM-----LVFTGN-----NLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTP
DT F+L++G + +M+ ++ TGN + LS F +K+ EL LG++ KR L +SQ Y++ LL + NM +K V+TP
Subjt: -----DT--FILKQGSTETHMM-----LVFTGN-----NLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTP
Query: LASHFRLS-SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTL------------------------LEGFTDAD
+A +LS S +T Y VGS+ YL TRPD+ YA++ S + + L L ++DAD
Subjt: LASHFRLS-SSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTL------------------------LEGFTDAD
Query: YAADLD----------------------KRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFH
+A D D K+ ++ EY S+ E W+ ++ EL + P+I+CD+ A +L NP H R KHI + +H
Subjt: YAADLD----------------------KRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFH
Query: YIRNVIAQKDVELVKVHTVENLSDMLTKALS
+IRN + + +V V T + L+D LTK LS
Subjt: YIRNVIAQKDVELVKVHTVENLSDMLTKALS
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-93 | 26.56 | Show/hide |
Query: MDQSKSLE---ENLDEFQKIVVD----------LNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMA
MD + +E ENL + K V+D L I E++ + ++ LNS + A + R++ T RN + + ++
Subjt: MDQSKSLE---ENLDEFQKIVVD----------LNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMA
Query: RGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTF
R S + S G RS + K +C +C +GH K CP +++T++ T + T ++ L V+ + W++DSG T
Subjt: RGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTF
Query: HMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGEL---DRSGCTIKSENGVMKVTKGSLVKLKGTLR
H+T + L+ Q GG V++ D T + TGS + T + L VLYVP + +NLIS+ L +R + +K + L+G +
Subjt: HMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGEL---DRSGCTIKSENGVMKVTKGSLVKLKGTLR
Query: HGLY---VLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPT
LY + VS A+ S K T S WH RL H S L + +S L + +L C C + KS +V F + L+Y++SD+W +
Subjt: HGLY---VLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITKGILDYVHSDLWGPT
Query: KEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTI
+S+ RY++ +D F+R W+YPLKQK + F+ +K VEN+ ++ L +DNG EFV + GI+ + +TP+ NGL+ER +R I
Subjt: KEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTI
Query: MERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKD---GKLNKRALKCIFIGYPQGVKGYKLWCIE
+E LL++AS+P +W A A YLINR P+ L L++P + G+ P+ E L+VFGC Y ++ KL ++ +C F+GY Y C+
Subjt: MERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKD---GKLNKRALKCIFIGYPQGVKGYKLWCIE
Query: KGMNKCIISRDVTFNETEMPYC-----VKEQQKQQT-------------------------GDHVVTEVRIASEVRP----------------SIDLDNQ
+ SR V F+E P+ V Q+Q++ G H+ T R S P S ++
Subjt: KGMNKCIISRDVTFNETEMPYC-----VKEQQKQQT-------------------------GDHVVTEVRIASEVRP----------------SIDLDNQ
Query: PPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDR--------------------------------------VQRERHAPIR-
P S ++ Q+ I S N+ QN L + +Q AP+
Subjt: PPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNNDLQNYQLTRDR--------------------------------------VQRERHAPIR-
Query: YGYA-----------DLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIK-------------
+ A +YA + AA+S EP T +A+ D +W+ AM E+ + N TW LV P PP+ ++ +WI+ K
Subjt: YGYA-----------DLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIK-------------
Query: -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYI
PV++ +SIR++L +AV I Q+DV FL G L + +YM+QP G+ K + D VCRL K++YGLKQ+PR WY+
Subjt: -------------------PVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYI
Query: RFDT----------------FILKQGSTETHMM-----LVFTGNN---LKK--KQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKY
T F+L++G + +M+ ++ TGN+ LK LS F +K +L LG++ KR + L +SQ Y + LL +
Subjt: RFDT----------------FILKQGSTETHMM-----LVFTGNN---LKK--KQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKY
Query: NMSDSKAVSTPLASHFRL---SSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTL-------------------
NM +K V+TP+A+ +L S ++ P + Y VGS+ YL TRPDL YA++ S + D + L
Subjt: NMSDSKAVSTPLASHFRL---SSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSASVSLCYSRDCDKSTL-------------------
Query: -----LEGFTDADYAADLD----------------------KRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQNAIHLAKNPS
L ++DAD+A D D K+ ++ EY S+ E W+ ++ EL + P+I+CD+ A +L NP
Subjt: -----LEGFTDADYAADLD----------------------KRSQLLLCRLRTEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQNAIHLAKNPS
Query: HHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALS
H R KHI + +H+IRN + + +V V T + L+D LTK LS
Subjt: HHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G21000.1 Gag-Pol-related retrotransposon family protein | 4.0e-06 | 25.48 | Show/hide |
Query: GKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLT
G + R KSK + + C LC+K H +++C + E + Y E+ L D D WI+ +MTP+ + T
Subjt: GKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLT
Query: NFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGEL
+ V D V+G G V+I +G + + NV++VP L RN++S G++
Subjt: NFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLYVPKLKRNLISLGEL
|
|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.7e-34 | 26.37 | Show/hide |
Query: LTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK--------------------------------PVV
L C A + EP T+ EA W AM++E+ ++ TW + PPN+K I KW+YKIK PV
Subjt: LTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK--------------------------------PVV
Query: RHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHM------
+ +S++LIL+I+ ++ + Q+D++ FL+G+L+E IYM P GY + + D + + VC L KS+YGLKQ+ RQW+++F ++ G ++H
Subjt: RHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGSTETHM------
Query: ----------------MLVFTGNNLK----KKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQ
+++ + N+ K QL + F++++LG LK LG+++ R + I Q Y + LL++ + K S P+ S+
Subjt: ----------------MLVFTGNNLK----KKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQ
Query: CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSAS--------------------------VSLCYSRDCDKSTLLEGFTDADYAADLD-KRS
+ + ++ Y +G +MYL I TR D+ +A++ S L YS + L+ F+DA + + D +RS
Subjt: CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSSAS--------------------------VSLCYSRDCDKSTLLEGFTDADYAADLD-KRS
Query: QLLLCRL---------------------RTEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIR
C EY +L A E +WL + EL L ++ CD+ AIH+A N HER+KHI+ H +R
Subjt: QLLLCRL---------------------RTEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQNAIHLAKNPSHHERSKHIDVKFHYIR
|
|
| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 6.6e-25 | 49.11 | Show/hide |
Query: GVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITK
GV+KV KG LKG LY+L+G+ +G + +A D + LWH RLAH+S+RG++ L ++G L K L FCE CI GK+ RV F G+H TK
Subjt: GVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHITK
Query: GILDYVHSDLWG
LDYVHSDLWG
Subjt: GILDYVHSDLWG
|
|
| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 6.6e-17 | 48.78 | Show/hide |
Query: NRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALK
NRTI+E+ R +L LP F +AA TA ++IN+ PSTA+N P EVW P+ +LR FGC AY H +GKL RA K
Subjt: NRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALK
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.0e-06 | 34.35 | Show/hide |
Query: ILKQGSTETHM-MLVFTGNNLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQER
IL GS+ T + ML+F QLS+ F MK+LG + LG+ +K L +SQ Y ++L M D K +STPL +L+SS +
Subjt: ILKQGSTETHM-MLVFTGNNLKKKQLSNEFEMKNLGELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQER
Query: IEMSNIPYCNAVGSIMYLMICTRPDLGYAMS
+ +I VG++ YL + TRPD+ YA++
Subjt: IEMSNIPYCNAVGSIMYLMICTRPDLGYAMS
|
|
