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IVF0023362 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023362
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-proteinase polyprotein
Genome locationchr01:20874282..20874806
RNA-Seq ExpressionIVF0023362
SyntenyIVF0023362
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036592.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.23e-7766.16Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M+EDES++EYNERVLEI NES  LGEK S+ KIV+KV RSLP KFD+KVT IEEAHDITKLKLDELFGSLLTFEMAIS+RENKK KGV FKS+YE+E++ 
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDGEG------------------------RIFKCRECGGVGHYQAECPTFLRK
        N+S  E N+N+SI LL KQFS VVKKF+N+NTTGSN++N IN++RKDGE                         R+F+CREC GVGHYQAECPTFLR+
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDGEG------------------------RIFKCRECGGVGHYQAECPTFLRK

KAA0052278.1 Receptor-like protein 12 [Cucumis melo var. makuwa]5.89e-8572.22Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M +DES+ EYNE+VLEI NESFNLGEKI + KIV+KV RSLPGKF+MKVT I+EAHDITKLKLD  F SLLTFEM ISNRENKK KGVAFKSVYEEES D
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKR------------------------KDGEGRIFKCRECGGVGHYQAECPTFLRK
        NKSSSE NVNESI LL K FSKVVKKFRN+N  GSNSRNS+NFKR                        KDGE RIFK RECGGVGHYQAECPTF RK
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKR------------------------KDGEGRIFKCRECGGVGHYQAECPTFLRK

KAA0054430.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.93e-8266.67Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M EDE++A YNERV+EI NESFNLG++I E+KIV+KV RSLPGKFDMKV  I+E HDIT LKLDELF SLL FEM ISNRE+KK KG+AFKS+YEEES D
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSI------------------------NFKRKDGEGRIFKCRECGGVGHYQAECPTFLRK
        NK +SE NVNES TL+TK+FSKVVK+FRNMN+TGSN+RNSI                        NF+R+DGEGR FKCREC G GHYQ ECP F RK
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSI------------------------NFKRKDGEGRIFKCRECGGVGHYQAECPTFLRK

TYJ98757.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.63e-7668.33Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        MFE+E++ +YNERVLEI NESFNLGE+I E  IV KV  SLPGKFDMKVT IEEAHDI KLKL+ELFGSL TFEMA S +++KK KGVAFK+VYEEE+ +
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDG------EGRIFKCRECGGVGHYQAECPTFLRK
        + +++EVNVNESI LLTKQFSKVVKKF NMNTTG+  R   +F+R+D       EGR FKC++CG +GHYQAECPT+LR+
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDG------EGRIFKCRECGGVGHYQAECPTFLRK

TYK22561.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]8.41e-7764.65Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M +DES+ +YNER+LEI NES  LGEKI E KIVQKV RSLPGKFDMKVT IEE HDITKLKLDELFGSLLTFEMAIS+RENKK K VAFKS+YE+ES+ 
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDGE------------------------GRIFKCRECGGVGHYQAECPTFLRK
        ++   E ++NESI LLTKQFSK+VKKF+N+NTTGS+++N  N++RKDGE                        GR+F+C+EC G+GH QAECPTFLRK
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDGE------------------------GRIFKCRECGGVGHYQAECPTFLRK

TrEMBL top hitse value%identityAlignment
A0A5A7UA03 Gag-proteinase polyprotein4.5e-6064.65Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M EDES+++YNERVLEI NES  LGEKI + KIV+KV RSLP KFDMKVT IEEAHDIT LKLDELF SLLTFEMAIS+RENKK KGVAFKS+YEEE+  
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKD------------------------GEGRIFKCRECGGVGHYQAECPTFLRK
        N+S +E N+NESI LL +QFSKVV+KF+N+NTTGSN +N  +++RKD                        GEG+ F+CRECGGVGHYQ EC TFLR+
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKD------------------------GEGRIFKCRECGGVGHYQAECPTFLRK

A0A5A7UAM6 Receptor-like protein 121.1e-6672.22Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M +DES+ EYNE+VLEI NESFNLGEKI + KIV+KV RSLPGKF+MKVT I+EAHDITKLKLD  F SLLTFEM ISNRENKK KGVAFKSVYEEES D
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFK------------------------RKDGEGRIFKCRECGGVGHYQAECPTFLRK
        NKSSSE NVNESI LL K FSKVVKKFRN+N  GSNSRNS+NFK                        RKDGE RIFK RECGGVGHYQAECPTF RK
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFK------------------------RKDGEGRIFKCRECGGVGHYQAECPTFLRK

A0A5D3CW16 Gag-proteinase polyprotein3.9e-6466.67Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M EDE++A YNERV+EI NESFNLG++I E+KIV+KV RSLPGKFDMKV  I+E HDIT LKLDELF SLL FEM ISNRE+KK KG+AFKS+YEEES D
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSI------------------------NFKRKDGEGRIFKCRECGGVGHYQAECPTFLRK
        NK +SE NVNES TL+TK+FSKVVK+FRNMN+TGSN+RNSI                        NF+R+DGEGR FKCREC G GHYQ ECP F RK
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSI------------------------NFKRKDGEGRIFKCRECGGVGHYQAECPTFLRK

A0A5D3DFT6 Gag-proteinase polyprotein1.1e-6164.65Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M +DES+ +YNER+LEI NES  LGEKI E KIVQKV RSLPGKFDMKVT IEE HDITKLKLDELFGSLLTFEMAIS+RENKK K VAFKS+YE+ES+ 
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKD------------------------GEGRIFKCRECGGVGHYQAECPTFLRK
        ++   E ++NESI LLTKQFSK+VKKF+N+NTTGS+++N  N++RKD                        GEGR+F+C+EC G+GH QAECPTFLRK
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKD------------------------GEGRIFKCRECGGVGHYQAECPTFLRK

A0A5D3DH72 Gag-proteinase polyprotein2.5e-6366.16Show/hide
Query:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID
        M+EDES++EYNERVLEI NES  LGEK S+ KIV+KV RSLP KFD+KVT IEEAHDITKLKLDELFGSLLTFEMAIS+RENKK KGV FKS+YE+E++ 
Subjt:  MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESID

Query:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDGEG------------------------RIFKCRECGGVGHYQAECPTFLRK
        N+S  E N+N+SI LL KQFS VVKKF+N+NTTGSN++N IN++RKDGE                         R+F+CREC GVGHYQAECPTFLR+
Subjt:  NKSSSEVNVNESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDGEG------------------------RIFKCRECGGVGHYQAECPTFLRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAGATGAGTCTATAGCTGAATATAACGAGAGAGTTCTGGAAATAGTGAATGAATCATTCAACCTTGGAGAAAAAATTTCTGAATTCAAGATAGTGCAAAAAGT
GCCACGTTCTTTACCTGGGAAATTTGACATGAAGGTTACAACTATAGAGGAAGCACATGATATAACTAAGCTAAAACTGGATGAATTGTTTGGGTCTCTTCTCACGTTCG
AGATGGCCATATCAAACAGAGAAAATAAAAAATGTAAAGGTGTTGCTTTTAAATCAGTATATGAAGAAGAGTCAATTGATAATAAATCATCAAGTGAAGTAAATGTAAAT
GAATCTATAACTCTTCTGACGAAACAATTTTCTAAAGTGGTAAAGAAGTTCAGAAATATGAATACAACTGGATCCAACTCTAGAAACTCAATTAACTTCAAAAGAAAAGA
TGGTGAAGGCAGAATTTTCAAATGTAGGGAGTGTGGAGGAGTTGGTCATTATCAGGCTGAATGTCCTACGTTTCTAAGAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAAGATGAGTCTATAGCTGAATATAACGAGAGAGTTCTGGAAATAGTGAATGAATCATTCAACCTTGGAGAAAAAATTTCTGAATTCAAGATAGTGCAAAAAGT
GCCACGTTCTTTACCTGGGAAATTTGACATGAAGGTTACAACTATAGAGGAAGCACATGATATAACTAAGCTAAAACTGGATGAATTGTTTGGGTCTCTTCTCACGTTCG
AGATGGCCATATCAAACAGAGAAAATAAAAAATGTAAAGGTGTTGCTTTTAAATCAGTATATGAAGAAGAGTCAATTGATAATAAATCATCAAGTGAAGTAAATGTAAAT
GAATCTATAACTCTTCTGACGAAACAATTTTCTAAAGTGGTAAAGAAGTTCAGAAATATGAATACAACTGGATCCAACTCTAGAAACTCAATTAACTTCAAAAGAAAAGA
TGGTGAAGGCAGAATTTTCAAATGTAGGGAGTGTGGAGGAGTTGGTCATTATCAGGCTGAATGTCCTACGTTTCTAAGAAAGTAA
Protein sequenceShow/hide protein sequence
MFEDESIAEYNERVLEIVNESFNLGEKISEFKIVQKVPRSLPGKFDMKVTTIEEAHDITKLKLDELFGSLLTFEMAISNRENKKCKGVAFKSVYEEESIDNKSSSEVNVN
ESITLLTKQFSKVVKKFRNMNTTGSNSRNSINFKRKDGEGRIFKCRECGGVGHYQAECPTFLRK