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IVF0023365 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023365
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32 family member A-like
Genome locationchr12:14910038..14910289
RNA-Seq ExpressionIVF0023365
SyntenyIVF0023365
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039105.1 acidic leucine-rich nuclear phosphoprotein 32 family member A-like [Cucumis melo var. makuwa]4.72e-2767.44Show/hide
Query:  KNGINWKVVQ---NKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSE
        KNG NWKVVQ   NK IWDV EVDDVENE LN+LEI+V H+VD HI+DDTL        +VERLVVC+V+DDFIDD DE LSH S+
Subjt:  KNGINWKVVQ---NKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSE

KAA0051730.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.01e-2563.64Show/hide
Query:  KNGINWKVVQ---NKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESS
        KNG NWK+VQ   NK IW+V ++DDV+NEQLNVLEI+VG RVD H+EDDTL        ++ER +V HV DDFIDDDDEQ+SHQS  S
Subjt:  KNGINWKVVQ---NKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESS

KAA0054375.1 uncharacterized protein E6C27_scaffold24G001090 [Cucumis melo var. makuwa]4.25e-3288.41Show/hide
Query:  KCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTLMVERLVVCHVADDFIDDDDEQLSHQSESSDDE
        + +W +  +DDVENEQLNVLEIIVGHRVDGHIEDDTLMVERLVVCHVADDFIDDDDEQLSHQSESSDDE
Subjt:  KCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTLMVERLVVCHVADDFIDDDDEQLSHQSESSDDE

KAA0058994.1 uncharacterized protein E6C27_scaffold233G00090 [Cucumis melo var. makuwa]1.04e-2664.04Show/hide
Query:  KNGINW--KVVQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESSDD
        KNG NW  +VVQNKC WDV EV+DVENEQLNVL+I+VGH VD H++D+TL        MVERL+V H  +DFI DDDEQLS Q  +SDD
Subjt:  KNGINW--KVVQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESSDD

KAA0065870.1 nucleosome assembly protein 1 [Cucumis melo var. makuwa]6.04e-2562.92Show/hide
Query:  KNGINWKVVQ---NKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESSD
        K+  NW VVQ   NK IWDVSEVDDV+N+QLNVL+I++GHRVD HIEDDTL        MVER +V H+ +DFI+D+DEQLS QS  SD
Subjt:  KNGINWKVVQ---NKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESSD

TrEMBL top hitse value%identityAlignment
A0A5A7TCH8 Acidic leucine-rich nuclear phosphoprotein 32 family member A-like3.7e-2067.44Show/hide
Query:  KNGINWKV---VQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSE
        KNG NWKV   VQNK IWDV EVDDVENE LN+LEI+V H+VD HI+DDTL        +VERLVVC+V+DDFIDD DE LSH S+
Subjt:  KNGINWKV---VQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSE

A0A5A7UL14 Uncharacterized protein2.7e-2388.41Show/hide
Query:  KCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTLMVERLVVCHVADDFIDDDDEQLSHQSESSDDE
        + +W +  +DDVENEQLNVLEIIVGHRVDGHIEDDTLMVERLVVCHVADDFIDDDDEQLSHQSESSDDE
Subjt:  KCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTLMVERLVVCHVADDFIDDDDEQLSHQSESSDDE

A0A5D3CK78 CACTA en-spm transposon protein1.4e-1963.64Show/hide
Query:  KNGINWK---VVQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESS
        KNG NWK   +VQNK IW+V ++DDV+NEQLNVLEI+VG RVD H+EDDTL        ++ER +V HV DDFIDDDDEQ+SHQS  S
Subjt:  KNGINWK---VVQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESS

A0A5D3CL36 DUF4216 domain-containing protein1.5e-1863.53Show/hide
Query:  KNGINWKVV---QNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQS
        KNG NWKVV   QNKCIWDV EV DV+N+ +N+LE++V H+VD HIEDDTL        +VER VV HV DDFIDD DE LSH S
Subjt:  KNGINWKVV---QNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQS

A0A5D3D7W4 Uncharacterized protein3.1e-1963.33Show/hide
Query:  KNGINW--KVVQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESSDDE
        KNG NW  +VVQNKC WDV EV+DVENEQLNVL+I+VGH VD H++D+TL        MVERL+V H  +DFI DDDEQLS Q  +SDD+
Subjt:  KNGINW--KVVQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTL--------MVERLVVCHVADDFIDDDDEQLSHQSESSDDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCAAAAAAATGGTATTAATTGGAAAGTTGTCCAAAATAAGTGCATATGGGACGTGTCCGAAGTGGACGATGTTGAGAATGAGCAACTGAATGTACTCGAAATCAT
TGTTGGCCATCGAGTCGACGGACACATTGAGGATGACACTCTTATGGTTGAAAGACTGGTTGTGTGTCATGTTGCTGACGACTTCATAGATGATGATGATGAACAATTGT
CACATCAAAGCGAATCAAGCGACGACGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCAAAAAAATGGTATTAATTGGAAAGTTGTCCAAAATAAGTGCATATGGGACGTGTCCGAAGTGGACGATGTTGAGAATGAGCAACTGAATGTACTCGAAATCAT
TGTTGGCCATCGAGTCGACGGACACATTGAGGATGACACTCTTATGGTTGAAAGACTGGTTGTGTGTCATGTTGCTGACGACTTCATAGATGATGATGATGAACAATTGT
CACATCAAAGCGAATCAAGCGACGACGAATGA
Protein sequenceShow/hide protein sequence
MTQKNGINWKVVQNKCIWDVSEVDDVENEQLNVLEIIVGHRVDGHIEDDTLMVERLVVCHVADDFIDDDDEQLSHQSESSDDE