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IVF0023371 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023371
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:6516736..6516903
RNA-Seq ExpressionIVF0023371
SyntenyIVF0023371
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038851.1 retrotransposon protein [Cucumis melo var. makuwa]1.47e-2890.91Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDED+GDSTYATTT SEDIQYIETTNEWSQWRDDLA SMFT+WQ RNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]3.07e-2890.91Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+DV+DED+GDSTY TTT SEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]2.64e-2992.73Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDD++DED+GDSTYATTT SEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]2.97e-2889.09Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+V+D+D+GDSTYATTT SEDIQYIETTNEWSQWRDDLAESMFTEWQLRN 
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]6.20e-2889.09Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+DV+DED+GDSTYATTT SEDIQYIETTNEWSQWRDDLAESMFT+WQLRN+
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TrEMBL top hitse value%identityAlignment
A0A5A7TUU4 Retrotransposon protein1.7e-2194.55Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDED+GDSTYATTT SEDIQYIETTNEWSQWRDDLAESMFT+WQLRNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7UG16 Retrotransposon protein7.5e-2296.36Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDED+GDSTYATTT SEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7V4C6 Retrotransposon protein1.7e-2194.55Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVED+D+GDSTYATTT SEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7V4Q8 Retrotransposon protein2.2e-2192.73Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDD++DED+GDSTYATTT SEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7VL61 Retrotransposon protein1.7e-2194.55Show/hide
Query:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVEDED+GDSTYATTTTSEDIQYIETTNEWSQW DDLAESMFT+WQLRNA
Subjt:  MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACAAGGGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACAAGGGGGACTCCACGTACGCGACGACCACCACTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVEDEDKGDSTYATTTTSEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA