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IVF0023378 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023378
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionFlagellar basal-body rod protein FlgB
Genome locationchr10:23192748..23193004
RNA-Seq ExpressionIVF0023378
SyntenyIVF0023378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041719.1 hypothetical protein E6C27_scaffold67G00550 [Cucumis melo var. makuwa]2.11e-1047.89Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKE
        MAK+K++DQ  KK+TP KA+PSK D +++ SN P++             LP   +VFG +GWN FSFKGKE
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKE

KAA0062631.1 hypothetical protein E6C27_scaffold79G001420 [Cucumis melo var. makuwa]2.19e-1454.67Show/hide
Query:  DTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLME
        D PVKANP KRD +V+ S+GPV+             LP   +VFG +GWNPFSFK KEV MT E I F+ NLLME
Subjt:  DTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLME

TYK11051.1 hypothetical protein E5676_scaffold73G00340 [Cucumis melo var. makuwa]4.15e-0937.93Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVTLPHQ---------------VFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLM
        M + K ++Q  KK+    A+    D K++RS+GPV+   Q               VFG EGWNPF+FKGK +PM  + I  M+ LL+
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVTLPHQ---------------VFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLM

TYK20947.1 hypothetical protein E5676_scaffold284G00950 [Cucumis melo var. makuwa]6.05e-1047.3Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPM
        MAK+K++DQ  KK+TP KA+PSK D +++ SN P++             LP   +VFG +GWN FSFKGKE  M
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPM

TYK25880.1 flagellar basal-body rod protein FlgB [Cucumis melo var. makuwa]6.59e-0741.77Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPV-------------TLP--HQVFGIEGWNPFSFKGKEVPMTYEVI
        M  NKN DQ  KKD    AN S+RD K++  +G +             TLP   +VFG +GWNPF+  GKE+P+  E I
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPV-------------TLP--HQVFGIEGWNPFSFKGKEVPMTYEVI

TrEMBL top hitse value%identityAlignment
A0A5A7TK20 Uncharacterized protein7.2e-0747.89Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKE
        MAK+K++DQ  KK+TP KA+PSK D +++ SN P++             LP   +VFG +GWN FSFKGKE
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKE

A0A5A7VAE2 Uncharacterized protein4.1e-1054.67Show/hide
Query:  DTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLME
        D PVKANP KRD +V+ S+GPV+             LP   +VFG +GWNPFSFK KEV MT E I F+ NLLME
Subjt:  DTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLME

A0A5D3CGX2 Uncharacterized protein1.4e-0537.93Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVTLPHQ---------------VFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLM
        M + K ++Q  KK+    A+    D K++RS+GPV+   Q               VFG EGWNPF+FKGK +PM  + I  M+ LL+
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVTLPHQ---------------VFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLM

A0A5D3DBE2 Uncharacterized protein4.2e-0747.3Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPM
        MAK+K++DQ  KK+TP KA+PSK D +++ SN P++             LP   +VFG +GWN FSFKGKE  M
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVT-------------LP--HQVFGIEGWNPFSFKGKEVPM

A0A5D3DRG2 Flagellar basal-body rod protein FlgB5.7e-0441.77Show/hide
Query:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPV-------------TLP--HQVFGIEGWNPFSFKGKEVPMTYEVI
        M  NKN DQ  KKD    AN S+RD K++  +G +             TLP   +VFG +GWNPF+  GKE+P+  E I
Subjt:  MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPV-------------TLP--HQVFGIEGWNPFSFKGKEVPMTYEVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAAACAAGAACAATGATCAGTTTGGAAAGAAAGACACACCAGTTAAGGCCAACCCATCTAAGAGAGATGCTAAAGTTTTGCGCTCCAACGGGCCTGTGACACT
TCCTCATCAAGTCTTTGGAATAGAAGGTTGGAATCCTTTCAGCTTCAAGGGCAAAGAGGTGCCCATGACTTATGAAGTCATAGGCTTTATGATGAATTTGCTCATGGAAG
GAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAAACAAGAACAATGATCAGTTTGGAAAGAAAGACACACCAGTTAAGGCCAACCCATCTAAGAGAGATGCTAAAGTTTTGCGCTCCAACGGGCCTGTGACACT
TCCTCATCAAGTCTTTGGAATAGAAGGTTGGAATCCTTTCAGCTTCAAGGGCAAAGAGGTGCCCATGACTTATGAAGTCATAGGCTTTATGATGAATTTGCTCATGGAAG
GAAAGTAA
Protein sequenceShow/hide protein sequence
MAKNKNNDQFGKKDTPVKANPSKRDAKVLRSNGPVTLPHQVFGIEGWNPFSFKGKEVPMTYEVIGFMMNLLMEGK