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IVF0023392 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023392
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease P
Genome locationchr01:6699166..6705661
RNA-Seq ExpressionIVF0023392
SyntenyIVF0023392
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000172 - ribonuclease MRP complex (cellular component)
GO:0005655 - nucleolar ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domainsIPR002759 - RNase P subunit Pop5/Rpp14/Rnp2-like
IPR038085 - RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061295.1 putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa]9.74e-109100Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]4.28e-10395.45Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDLSGNTRACKNTALRL+GLKFEQYKLMVGH LPDNV +QMQNCLEKIA LEN
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

XP_008461474.1 PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo]2.30e-10798.7Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVK+ MQNCLEKIANLEN
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

XP_022932062.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita moschata]1.42e-9286.36Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV+YVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDL+GN+RACKNTALRLD LKFEQYKLMVG  + D V +QMQNCLEKI +L+N
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]3.38e-10093.51Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDLSGNTRACKNTALRLD LKFEQYKLMVGH LPDNV +QMQNCLEKIA LE+
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

TrEMBL top hitse value%identityAlignment
A0A0A0K7W3 Ribonuclease P9.4e-7097.08Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDN
        LLDLSGNTRACKNTALRL+GLKFEQYKLMVGH LPDN
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDN

A0A1S3CEI9 Ribonuclease P2.4e-8198.7Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVK+ MQNCLEKIANLEN
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

A0A5D3CDD4 Ribonuclease P2.1e-82100Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

A0A6J1EVL4 Ribonuclease P4.2e-7086.36Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV+YVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDL+GN+RACKNTALRLD LKFEQYKLMVG  + D V +QMQNCLEKI +L+N
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

A0A6J1IBH7 Ribonuclease P5.5e-7086.36Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        LLDL+GN+RACKNTALR+D LKFEQYKLMVG  + D V +QMQNCLEKI  L+N
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

SwissProt top hitse value%identityAlignment
Q1JQ92 Ribonuclease P/MRP protein subunit POP51.2e-1027.85Show/hide
Query:  MVRFKNRYMVFEVLL-DPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C
        MVRFK+RY++ EV+  DP   L  +D ++ T       ++D+I    G  G A+    F V+Y+N  T + ++R  +E Y+ VW+A+  + S+ N     
Subjt:  MVRFKNRYMVFEVLL-DPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C

Query:  PVVFNLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLE
        P   N L + G  R C+   ++ +     Q  +++ +C  +  +  +Q  + K   LE
Subjt:  PVVFNLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLE

Q54EP3 Probable ribonuclease P/MRP protein subunit POP51.3e-1230.16Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVR KNRY++ EV+   N+         + Q+ +S  +K+ +    GE  + +   + ++ YVNP T + IIR S E Y+++W A+T++ S    P+ F 
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLSGNTRACKNTALRLDGLKFEQY
        ++ + G+ R C+  A+++ G +   Y
Subjt:  LLDLSGNTRACKNTALRLDGLKFEQY

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP52.2e-4762.58Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF
        MV FKNRYM+ EV LDP+K+L  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQVKYVNPITKLCI+R+SRE+++ VW AIT+V+SI NCPV+ 
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        NLLD+SG  RAC++TAL+ D  KFEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN

Q969H6 Ribonuclease P/MRP protein subunit POP51.9e-1127.85Show/hide
Query:  MVRFKNRYMVFEVLL-DPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C
        MVRFK+RY++ E++  DP   L  DD ++      S  ++D+I    G  G A+    F V+Y+N  T + ++R  +E YQ VW+A+  +  + N     
Subjt:  MVRFKNRYMVFEVLL-DPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C

Query:  PVVFNLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLE
        P  FN L + G  R C+   ++ +     Q  +++ +C  +  +  +Q  + +   LE
Subjt:  PVVFNLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLE

Q9UU90 Ribonuclease P/MRP protein subunit POP52.4e-1433.58Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNC
        MVRFK+RY++FEVL    K    D P I     IT  ++SK I+  +  NFG+ G      S  VKY +P T   I+R SR+ ++  WAA+ ++R +   
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNC

Query:  PVVFNLLDLSGNTRACKNTALRLDGLKFEQYKLM
        PV+  ++ +SG  +  +  A+  +  +     LM
Subjt:  PVVFNLLDLSGNTRACKNTALRLDGLKFEQYKLM

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein1.5e-4862.58Show/hide
Query:  MVRFKNRYMVFEVLLDPNKNLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF
        MV FKNRYM+ EV LDP+K+L  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQVKYVNPITKLCI+R+SRE+++ VW AIT+V+SI NCPV+ 
Subjt:  MVRFKNRYMVFEVLLDPNKNLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF

Query:  NLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN
        NLLD+SG  RAC++TAL+ D  KFEQ        L +    QM   LEKI  LEN
Subjt:  NLLDLSGNTRACKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGTTTAAAAACCGATACATGGTGTTTGAAGTTCTCTTGGATCCCAATAAAAACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGATAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGTTATGTATTATTAGAG
CCTCCAGAGAGGATTACCAGAATGTGTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGTCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCC
TGCAAGAACACTGCCTTGAGGCTCGATGGATTGAAGTTTGAACAATACAAACTTATGGTTGGACATTGTCTTCCAGATAATGTAAAGATGCAAATGCAGAACTGTCTCGA
GAAGATTGCAAATTTAGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTGTCCCTCGTCGTCGTCTCTGTCCGTCGTCTCTGTCCGTCGTCTCTGTTCGTCTTCGTCTTCCCCGTCGTCCACATGGGTTTCGCTTAGGGTTCTTCGTCTACCGG
CTCGTCTCTTTACTGCTATTAGACACTTGGAAGCTAATGATTCGAGATCTTAAGTTCCACATCCTCTTCTGACCTTCGTTTGTTTCCGACGACCTCTGCTGACTATCTCT
TTGCATCAACAACAAGGCATAAGTCGTTACTGAAGTTAGAAGGTACAAAACAATGGTGAGGTTTAAAAACCGATACATGGTGTTTGAAGTTCTCTTGGATCCCAATAAAA
ACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGATAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGA
TCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGTTATGTATTATTAGAGCCTCCAGAGAGGATTACCAGAATGTGTGGGCTGCAATTACTATGGTGAGGAGTATCAG
CAATTGTCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCCTGCAAGAACACTGCCTTGAGGCTCGATGGATTGAAGTTTGAACAATACAAACTTATGG
TTGGACATTGTCTTCCAGATAATGTAAAGATGCAAATGCAGAACTGTCTCGAGAAGATTGCAAATTTAGAAAACTGATTGTATTGTTGCCATTTATATGAAATCCACCAT
TTCAAGATAATTTTAATTAGATAATTCACTTGAATCCCACACATTTTTGTTCCGGGTCACTCCCTGCCCCTTCGCATTTTTATTTCATTTGATCTTTTTGCAGTTTTTGA
TTGTTAGTTGTACGAGAGAAGTAGTTCAATGAGACAGTTACATGATTGGTG
Protein sequenceShow/hide protein sequence
MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRA
CKNTALRLDGLKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN