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IVF0023393 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023393
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr11:23649075..23649502
RNA-Seq ExpressionIVF0023393
SyntenyIVF0023393
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]1.15e-4886.52Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MST+ SIP +IVHKARTNLG+NISYQK WRAKEHMVKIL  D VESYALIPRFFDKLVESNPG CTALEMDDSG+FK CFMAFGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

KAA0052073.1 uncharacterized protein E6C27_scaffold578G00430 [Cucumis melo var. makuwa]4.12e-4984.27Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        +STD SIP++IVHKARTNLGVNISYQK WRAKEHMVKIL  D VE+YALIPRFFDKLVESNPG CT LEMD+SG+FK CFMAFGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

KAA0056305.1 Mutator-like transposase [Cucumis melo var. makuwa]2.38e-4886.36Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIE
        MSTD SIPK+IVHKARTNLGVNISYQKVWR KEHMVKIL  D VESYALIPRFFDKLVE NPG C ALEMDDS Y K CFMAFGASIE
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIE

KAA0064043.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]1.20e-4887.64Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MSTD+SIPK+IVHKARTNLGVNISYQK WRAKEHMVKIL  D  ESYALIPRFFDKLVESNPG CTALEMDDSG+FK CFM FGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]1.27e-4986.52Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MST+ SIP +IVHKARTNLG+NISYQK WRAKEHMVKIL  D VESYALIPRFFDKLVESNPG CTALEMDDSG+FK CFMAFGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

TrEMBL top hitse value%identityAlignment
A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 42.1e-3786.52Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MST+ SIP +IVHKARTNLG+NISYQK WRAKEHMVKIL  D VESYALIPRFFDKLVESNPG CTALEMDDSG+FK CFMAFGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

A0A5A7V7F3 Protein FAR1-RELATED SEQUENCE 47.1e-3887.64Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MSTD+SIPK+IVHKARTNLGVNISYQK WRAKEHMVKIL  D  ESYALIPRFFDKLVESNPG CTALEMDDSG+FK CFM FGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 42.1e-3786.52Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MST+ SIP +IVHKARTNLG+NISYQK WRAKEHMVKIL  D VESYALIPRFFDKLVESNPG CTALEMDDSG+FK CFMAFGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like6.0e-3786.52Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MSTD SIPK+IVHKA TNLGVNISYQK WR KEHMVKIL  D VESYALIPRFFDKLVESNP  CTALEMDDSG+FK CFMAFGASIEG
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

A0A5D3C7L7 Uncharacterized protein3.5e-3786.52Show/hide
Query:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG
        MSTD SIPK+IVHKARTNLGV+ISYQKVWRAKEHMVKIL  D VESY LIPRFFDKLVESNPG CTALEMDD G+FK CFMAFGASI+G
Subjt:  MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTGATAATTCCATTCCTAAAGATATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAAGTTTGGAGGGCAAAAGAACATATGGTAAA
GATATTACAGAGTGACGCGGTTGAATCATATGCATTGATTCCAAGATTCTTTGATAAATTAGTTGAATCTAACCCAGGTATATGCACTGCTTTAGAAATGGATGATAGTG
GTTATTTTAAGCTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTGATAATTCCATTCCTAAAGATATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAAGTTTGGAGGGCAAAAGAACATATGGTAAA
GATATTACAGAGTGACGCGGTTGAATCATATGCATTGATTCCAAGATTCTTTGATAAATTAGTTGAATCTAACCCAGGTATATGCACTGCTTTAGAAATGGATGATAGTG
GTTATTTTAAGCTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGA
Protein sequenceShow/hide protein sequence
MSTDNSIPKDIVHKARTNLGVNISYQKVWRAKEHMVKILQSDAVESYALIPRFFDKLVESNPGICTALEMDDSGYFKLCFMAFGASIEG