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IVF0023412 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023412
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLYR motif-containing protein 4
Genome locationchr02:21403718..21404280
RNA-Seq ExpressionIVF0023412
SyntenyIVF0023412
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453246.1 PREDICTED: LYR motif-containing protein 4 [Cucumis melo]4.05e-5598.89Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSA+YSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

XP_011660289.1 LYR motif-containing protein 4 [Cucumis sativus]4.39e-5092.22Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MA+PTRSEALSLLRSLIRT+R F DYNIREYAKRR VDGFRHNRNLSDP SISSAYADGKAQLEVAKRQSAVYSLY PKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

XP_022134602.1 LYR motif-containing protein 4-like [Momordica charantia]4.07e-4682.22Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MA PTR+EALSLLRSL+RT+R FCDYN+REYAKRR VDGFRHNRNLSDPSSISSAYADG+AQLEVA+RQS VYS +APKVKSIM+ H  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

XP_022932898.1 LYR motif-containing protein 4 [Cucurbita moschata]4.95e-4785.56Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSL+RT+R FCDYNIREYAKRR VDGFRHNRNLSDPSSI  AYADGKAQLEVAKRQS VYSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

XP_038879775.1 LYR motif-containing protein 4-like [Benincasa hispida]1.26e-4990Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        M APTRSEALSLLRS +RT+R FCDYNIREYAKRR VDGFRHNRNLSDP SISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME HR N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

TrEMBL top hitse value%identityAlignment
A0A0A0LPH2 Uncharacterized protein3.0e-3692.22Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MA+PTRSEALSLLRSLIRT+R F DYNIREYAKRR VDGFRHNRNLSDP SISSAYADGKAQLEVAKRQSAVYSLY PKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

A0A1S3BV74 LYR motif-containing protein 44.5e-4098.89Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSA+YSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

A0A5A7UTC8 LYR motif-containing protein 44.5e-4098.89Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSA+YSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

A0A6J1F322 LYR motif-containing protein 46.3e-3485.56Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSL+RT+R FCDYNIREYAKRR VDGFRHNRNLSDPSSI  AYADGKAQLEVAKRQS VYSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

A0A6J1IC29 LYR motif-containing protein 46.3e-3485.56Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSL+RT+R FCDYNIREYAKRR VDGFRHNRNLSDPSSI  AYADGKAQLEVAKRQS VYSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 41.2e-1043.53Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME
        MAA +R++ L L R+L+R S++F  YN R YA RR+ D FR N+N++D   I       KA LEV +RQ  +  +YA + K I+E
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME

B5XD90 LYR motif-containing protein 4B6.8e-0942.35Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME
        MAA T ++ LSL R L++ S +F  YN R YA RRV D FR NR++ DP  +      G+  L++ +RQ A+  +Y P  K+I+E
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME

Q0VCG0 LYR motif-containing protein 41.2e-0838.96Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYA
        MAA +R++ L L R+++R S++F  YN R YA RR+ D FR N+N+ DP  I +     K  L + +RQ  +  +Y+
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYA

Q8K215 LYR motif-containing protein 41.0e-0941.56Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYA
        MAA +R++ L L R+++R S+ F  YN R YA RR+ D FR N+N+ DP  I +     K  LE+ +RQ  +  LY+
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYA

Q9HD34 LYR motif-containing protein 48.0e-1042.86Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYA
        MAA +R++ LSL R+++R S++F  YN R YA RR+ D FR N+N+ DP  I +     K  L V +RQ  +  LY+
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein4.6e-2162.03Show/hide
Query:  SEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME
        SE LSL R+L+R  RQF DYNIREY+KRR +DGFR N+NL+DPS ++ AYA+ K QL VA+R   VY  Y PK K+IME
Subjt:  SEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCAACAAGATCGGAGGCTCTTTCGCTTCTCCGCTCTCTGATCCGTACATCCCGTCAGTTCTGCGATTACAACATCAGAGAGTACGCCAAACGACGCGTCGT
CGATGGCTTCCGCCATAACCGAAACCTTTCCGACCCTTCATCCATTTCCTCCGCCTACGCCGATGGAAAGGCTCAGCTTGAAGTTGCTAAAAGACAGTCCGCCGTTTACT
CCCTCTATGCGCCGAAGGTAAAGAGCATCATGGAGGCTCATCGCATAAACTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTGTTCAATGCCAAAGAAAGAGAATCTCTGTTCTTCCTTTCCTTCTTTCTTCCTTTGCTTCTCACCGTAGGATTCTTCGAGTTCCTTCGAAAATGGCGGCTCCAACA
AGATCGGAGGCTCTTTCGCTTCTCCGCTCTCTGATCCGTACATCCCGTCAGTTCTGCGATTACAACATCAGAGAGTACGCCAAACGACGCGTCGTCGATGGCTTCCGCCA
TAACCGAAACCTTTCCGACCCTTCATCCATTTCCTCCGCCTACGCCGATGGAAAGGCTCAGCTTGAAGTTGCTAAAAGACAGTCCGCCGTTTACTCCCTCTATGCGCCGA
AGGTAAAGAGCATCATGGAGGCTCATCGCATAAACTGACAGAAGCTCTTTTGCCTTAATTTATTGTAATTCTAATTCTATTATGATAGATTTCGTGAGTTAGGGTTTATT
TCTGCTTCACGGATCATACCTTCTCATACCTTTTCTACTAAGAATTTAATAAATCGCTTGTTCTCTGGTTTTTGCTTGTTTGTTTGTGCAATTAATCCTTTATTGTGGGA
TGGAATATGTAAT
Protein sequenceShow/hide protein sequence
MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRIN