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IVF0023424 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023424
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:18205947..18206255
RNA-Seq ExpressionIVF0023424
SyntenyIVF0023424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032819.1 retrotransposon protein [Cucumis melo var. makuwa]5.80e-5183.33Show/hide
Query:  MFSRNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMI
        +F R++AT RFAETF DVGSNEP GY+RFDMGDGNEEF PVYSQGIDLSQ+D+R S+PSRA EGRTGSSGSKRKRGSQR+LDVEGI+LALDQTNEQLR I
Subjt:  MFSRNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMI

Query:  AE
        AE
Subjt:  AE

KAA0055383.1 retrotransposon protein [Cucumis melo var. makuwa]2.11e-5085.44Show/hide
Query:  MFSRNRATSRFAETFADVGSNEPSG-YDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM
        +F R+RAT+RF ETFADVGSNEPSG YDRFDMGDGNE+F PVYSQGIDLSQ+DVR S+PSRASEGRTGSSGSKRKRGSQRD DVE I+LALDQTNEQLR 
Subjt:  MFSRNRATSRFAETFADVGSNEPSG-YDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM

Query:  IAE
        IAE
Subjt:  IAE

KAA0062979.1 retrotransposon protein [Cucumis melo var. makuwa]1.13e-60100Show/hide
Query:  RNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMIAE
        RNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMIAE
Subjt:  RNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMIAE

TYJ99310.1 retrotransposon protein [Cucumis melo var. makuwa]7.59e-5185.44Show/hide
Query:  MFSRNRATSRFAETFADVGSNEPSG-YDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM
        +F R+RAT+RF ETFADVGSNEPSG YDRFDMGDGNE+F PVYSQGIDLSQ+DVR S+PSRASEGRTGSSGSKRKRGSQRD DVE I+LALDQTNEQLR 
Subjt:  MFSRNRATSRFAETFADVGSNEPSG-YDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM

Query:  IAE
        IAE
Subjt:  IAE

TYK21946.1 retrotransposon protein [Cucumis melo var. makuwa]1.24e-4981.55Show/hide
Query:  MFSRNRATSRFAETFADVGSNEPSG-YDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM
        +F R+RAT RFAETFADVGSNEP G YDRFDMGDGNE+F PVYSQG+D+SQ+DVR S+PSRASEGRTGSSGSKRKR SQRD DV+ I+LALDQTNEQLR 
Subjt:  MFSRNRATSRFAETFADVGSNEPSG-YDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM

Query:  IAE
        IAE
Subjt:  IAE

TrEMBL top hitse value%identityAlignment
A0A5A7UHG9 Retrotransposon protein7.4e-3985.44Show/hide
Query:  MFSRNRATSRFAETFADVGSNEPS-GYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM
        +F R+RAT+RF ETFADVGSNEPS GYDRFDMGDGNE+F PVYSQGIDLSQ+DVR S+PSRASEGRTGSSGSKRKRGSQRD DVE I+LALDQTNEQLR 
Subjt:  MFSRNRATSRFAETFADVGSNEPS-GYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM

Query:  IAE
        IAE
Subjt:  IAE

A0A5A7VBK0 Retrotransposon protein1.4e-45100Show/hide
Query:  RNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMIAE
        RNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMIAE
Subjt:  RNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMIAE

A0A5A7VHM3 Retrotransposon protein1.6e-3883.5Show/hide
Query:  MFSRNRATSRFAETFADVGSNEP-SGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM
        +F R+RAT RFAETFADVGSNEP  GYDRFDMGDGNE+F PVYSQG+D+SQ+DVR S+PSRASEGRTGSSGSKRKRGSQRD DVE IYL LDQTNEQLR 
Subjt:  MFSRNRATSRFAETFADVGSNEP-SGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM

Query:  IAE
        IAE
Subjt:  IAE

A0A5D3BHP6 Retrotransposon protein7.4e-3985.44Show/hide
Query:  MFSRNRATSRFAETFADVGSNEPS-GYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM
        +F R+RAT+RF ETFADVGSNEPS GYDRFDMGDGNE+F PVYSQGIDLSQ+DVR S+PSRASEGRTGSSGSKRKRGSQRD DVE I+LALDQTNEQLR 
Subjt:  MFSRNRATSRFAETFADVGSNEPS-GYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRM

Query:  IAE
        IAE
Subjt:  IAE

A0A5D3E2S0 Retrotransposon protein7.4e-3983.33Show/hide
Query:  MFSRNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMI
        +F R++AT RFAETF DVGSNEP GY+RFDMGDGNEEF PVYSQGIDLSQ+D+R S+PSRA EGRTGSSGSKRKRGSQR+LDVEGI+LALDQTNEQLR I
Subjt:  MFSRNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMI

Query:  AE
        AE
Subjt:  AE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGTCGAAATAGGGCGACGAGTCGGTTCGCTGAGACATTTGCCGACGTGGGGTCTAACGAGCCTAGCGGGTATGACAGATTTGATATGGGGGATGGAAACGAGGA
GTTCTCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAAAACGATGTACGTGTATCCCAACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCCAAAAGAA
AGAGGGGAAGTCAGCGAGACTTGGATGTTGAAGGCATATATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGATGATTGCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGTCGAAATAGGGCGACGAGTCGGTTCGCTGAGACATTTGCCGACGTGGGGTCTAACGAGCCTAGCGGGTATGACAGATTTGATATGGGGGATGGAAACGAGGA
GTTCTCGCCCGTGTACAGCCAGGGGATTGACCTCTCGCAAAACGATGTACGTGTATCCCAACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCCAAAAGAA
AGAGGGGAAGTCAGCGAGACTTGGATGTTGAAGGCATATATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGATGATTGCGGAGTGA
Protein sequenceShow/hide protein sequence
MFSRNRATSRFAETFADVGSNEPSGYDRFDMGDGNEEFSPVYSQGIDLSQNDVRVSQPSRASEGRTGSSGSKRKRGSQRDLDVEGIYLALDQTNEQLRMIAE