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IVF0023428 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023428
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr06:20752645..20753420
RNA-Seq ExpressionIVF0023428
SyntenyIVF0023428
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025461.1 uncharacterized protein E6C27_scaffold417G00600 [Cucumis melo var. makuwa]1.32e-6070.99Show/hide
Query:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDD---------------------------
        MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDD                           
Subjt:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDD---------------------------

Query:  ------------------SPISNPSIINQESVPESEPVNQSIGVNDENVELDVNNAPLNIRP
                          SPISNPSIINQESVPESEPVNQSIGVNDENVELDVNNAPLN  P
Subjt:  ------------------SPISNPSIINQESVPESEPVNQSIGVNDENVELDVNNAPLNIRP

KAA0040417.1 uncharacterized protein E6C27_scaffold35G00400 [Cucumis melo var. makuwa]1.66e-4252.63Show/hide
Query:  MRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSPISN------PSIINQESVPESEPVNQS---
        MRGH FKSTPSRRPYWL SEKN+V+ SDSSSVSL D+NV      N++S+RV S+S++S MD DERD+ P++       P I  Q+SVP+ + V+QS   
Subjt:  MRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSPISN------PSIINQESVPESEPVNQS---

Query:  IGVN-----DENVELDVNNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKY
        +G N      ++VE + N+AP  + P           P AD K K  KTQ+G  MVT +TGR+K+ PNIPSVPID ISF L+ESVQRWKY
Subjt:  IGVN-----DENVELDVNNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKY

KAA0046513.1 uncharacterized protein E6C27_scaffold114G00110 [Cucumis melo var. makuwa]8.89e-3642.06Show/hide
Query:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------
        MH V+MRGHRFKSTPSRRPY L  EKN+V+  DSS++S+ D+ +     +NVES+ V SKSH+S MD +ERDD P                         
Subjt:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------

Query:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET
               I   S+ + Q SVP+  PV QS       +  ND EN++ DV        N AP ++ P           P ADPK K +K Q+  H +T + 
Subjt:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET

Query:  GRRKVPPNIPSVPIDRISFHLEESVQRWKYVVQ
        GR+K+PPNIP  PID ISFHLEESVQRW   ++
Subjt:  GRRKVPPNIPSVPIDRISFHLEESVQRWKYVVQ

TYJ98698.1 uncharacterized protein E5676_scaffold429G00370 [Cucumis melo var. makuwa]3.72e-2846.82Show/hide
Query:  KNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSPISN-------PSIINQESVPESEPVNQS---IGVN-----DENVELDVNN
        KN+V+ SDSSSVSL D+NV      N++S+RV S+S++S MD DERD+ P++        P I  Q+SVP+ + V+QS   +G N      ++VE + N+
Subjt:  KNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSPISN-------PSIINQESVPESEPVNQS---IGVN-----DENVELDVNN

Query:  APLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKYVV
        AP  + P           P AD K K  KTQ+G  MVT +TGR+K+ PNIPSVPID ISF L+ESVQRW + V
Subjt:  APLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKYVV

XP_008462765.1 PREDICTED: uncharacterized protein LOC103501050 [Cucumis melo]1.18e-3141.78Show/hide
Query:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------
        MH V+MRGHRFKSTPSRRPY L  EKN+V+  DSS++S+ D+ +     +NVES+ V SKSH+S MD +ERDD P                         
Subjt:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------

Query:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET
               I   S+ + Q SVP+  PV QS       +  ND EN++ DV        N AP ++ P           P ADPK K +K Q+  H +T + 
Subjt:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET

Query:  GRRKVPPNIPSVPIDRISFHLEESV
        GR+K+PPNIP  PID ISFHLEES+
Subjt:  GRRKVPPNIPSVPIDRISFHLEESV

TrEMBL top hitse value%identityAlignment
A0A1S3CHR6 uncharacterized protein LOC1035010501.3e-2741.78Show/hide
Query:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------
        MH V+MRGHRFKSTPSRRPY L  EKN+V+  DSS++S+ D+ +     +NVES+ V SKSH+S MD +ERDD P                         
Subjt:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------

Query:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET
               I   S+ + Q SVP+  PV QS       +  ND EN++ DV        N AP ++ P           P ADPK K +K Q+  H +T + 
Subjt:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET

Query:  GRRKVPPNIPSVPIDRISFHLEESV
        GR+K+PPNIP  PID ISFHLEES+
Subjt:  GRRKVPPNIPSVPIDRISFHLEESV

A0A5A7SMJ7 Uncharacterized protein1.8e-4870.99Show/hide
Query:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDD---------------------------
        MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDD                           
Subjt:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDD---------------------------

Query:  ------------------SPISNPSIINQESVPESEPVNQSIGVNDENVELDVNNAPLNIRP
                          SPISNPSIINQESVPESEPVNQSIGVNDENVELDVNNAPLN  P
Subjt:  ------------------SPISNPSIINQESVPESEPVNQSIGVNDENVELDVNNAPLNIRP

A0A5A7TFT6 Uncharacterized protein7.6e-3653.16Show/hide
Query:  MRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP------ISNPSIINQESVPESEPVNQS---
        MRGH FKSTPSRRPYWL SEKN+V+ SDSSSVSL D+NV      N++S+RV S+S++S MD DERD+ P      +S P I  Q+SVP+ + V+QS   
Subjt:  MRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP------ISNPSIINQESVPESEPVNQS---

Query:  IGVN-----DENVELDVNNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKY
        +G N      ++VE + N+AP  + P           P AD K K  KTQ+G  MVT +TGR+K+ PNIPSVPID ISF L+ESVQRWKY
Subjt:  IGVN-----DENVELDVNNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKY

A0A5A7TSJ3 Uncharacterized protein9.7e-3142.06Show/hide
Query:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------
        MH V+MRGHRFKSTPSRRPY L  EKN+V+  DSS++S+ D+ +     +NVES+ V SKSH+S MD +ERDD P                         
Subjt:  MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------------------------

Query:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET
               I   S+ + Q SVP+  PV QS       +  ND EN++ DV        N AP ++ P           P ADPK K +K Q+  H +T + 
Subjt:  -------ISNPSIIN-QESVPESEPVNQS-------IGVND-ENVELDV--------NNAPLNIRP-----------PPADPKQKSEKTQKGSHMVTIET

Query:  GRRKVPPNIPSVPIDRISFHLEESVQRWKYVVQ
        GR+K+PPNIP  PID ISFHLEESVQRW   ++
Subjt:  GRRKVPPNIPSVPIDRISFHLEESVQRWKYVVQ

A0A5D3BKG6 Uncharacterized protein5.1e-2447.4Show/hide
Query:  KNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------ISNPSIINQESVPESEPVNQS---IGVN-----DENVELDVNN
        KN+V+ SDSSSVSL D+NV      N++S+RV S+S++S MD DERD+ P       +S P I  Q+SVP+ + V+QS   +G N      ++VE + N+
Subjt:  KNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSP-------ISNPSIINQESVPESEPVNQS---IGVN-----DENVELDVNN

Query:  APLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKYVV
        AP  + P           P AD K K  KTQ+G  MVT +TGR+K+ PNIPSVPID ISF L+ESVQRW + V
Subjt:  APLNIRP-----------PPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGAGTTCAAATGAGAGGCCATCGATTCAAGAGTACTCCTTCTCGTAGACCCTATTGGCTGCCTTCTGAGAAGAATCGGGTATCTTCTTCTGATAGTTCAAGTGT
TTCGTTGCTTGATGATAATGTTTATGAAAATGCTCCTAAAAATGTTGAGTCTGATCGTGTGCCCTCCAAGTCTCATTTATCTGTTATGGATTATGATGAGAGGGATGATT
CTCCCATTTCAAATCCCTCTATCATTAATCAAGAATCTGTTCCTGAATCTGAACCTGTGAATCAATCTATTGGTGTGAATGATGAAAATGTTGAACTAGATGTCAATAAT
GCACCTCTTAATATCAGACCACCTCCTGCAGACCCTAAACAAAAGTCTGAGAAAACCCAAAAAGGTAGTCATATGGTGACAATCGAGACTGGCCGAAGAAAAGTGCCTCC
AAATATTCCATCTGTGCCCATTGATAGAATCTCATTTCATTTAGAAGAGAGTGTTCAGAGATGGAAATATGTTGTACAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCGAGTTCAAATGAGAGGCCATCGATTCAAGAGTACTCCTTCTCGTAGACCCTATTGGCTGCCTTCTGAGAAGAATCGGGTATCTTCTTCTGATAGTTCAAGTGT
TTCGTTGCTTGATGATAATGTTTATGAAAATGCTCCTAAAAATGTTGAGTCTGATCGTGTGCCCTCCAAGTCTCATTTATCTGTTATGGATTATGATGAGAGGGATGATT
CTCCCATTTCAAATCCCTCTATCATTAATCAAGAATCTGTTCCTGAATCTGAACCTGTGAATCAATCTATTGGTGTGAATGATGAAAATGTTGAACTAGATGTCAATAAT
GCACCTCTTAATATCAGACCACCTCCTGCAGACCCTAAACAAAAGTCTGAGAAAACCCAAAAAGGTAGTCATATGGTGACAATCGAGACTGGCCGAAGAAAAGTGCCTCC
AAATATTCCATCTGTGCCCATTGATAGAATCTCATTTCATTTAGAAGAGAGTGTTCAGAGATGGAAATATGTTGTACAGAGATGA
Protein sequenceShow/hide protein sequence
MHRVQMRGHRFKSTPSRRPYWLPSEKNRVSSSDSSSVSLLDDNVYENAPKNVESDRVPSKSHLSVMDYDERDDSPISNPSIINQESVPESEPVNQSIGVNDENVELDVNN
APLNIRPPPADPKQKSEKTQKGSHMVTIETGRRKVPPNIPSVPIDRISFHLEESVQRWKYVVQR