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IVF0023448 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023448
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:23589226..23589642
RNA-Seq ExpressionIVF0023448
SyntenyIVF0023448
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033515.1 hypothetical protein E6C27_scaffold261G00580 [Cucumis melo var. makuwa]4.64e-88100Show/hide
Query:  MKEAKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDS
        MKEAKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDS
Subjt:  MKEAKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDS

Query:  SLVKKLLDSVPNKYLPIIAGIEQSKISTPCHLKKRSDE
        SLVKKLLDSVPNKYLPIIAGIEQSKISTPCHLKKRSDE
Subjt:  SLVKKLLDSVPNKYLPIIAGIEQSKISTPCHLKKRSDE

XP_031737549.1 uncharacterized protein LOC116402439 [Cucumis sativus]3.25e-6287.5Show/hide
Query:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV
        A+V+ KKDK AR+YILQCIP+DVLLQIAKKKTAKEIWDSLK +YLGSERVKMARVQTLK EF VL+MKETETIDEFAGKISGLASKF+TLGVALEDSSLV
Subjt:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV

Query:  KKLLDSVPNKYLPIIAGIEQ
        KKLLDSVP+KYLPI+ GIEQ
Subjt:  KKLLDSVPNKYLPIIAGIEQ

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]4.38e-6087.5Show/hide
Query:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV
        A+V+ KKDK A AYILQCIP+DVLLQIAKKKTAKEIWDSLK +YLGSERVKMARVQTLKREF+VL+MKETE IDEFAGKISGLASKF+TLGVAL+DSSLV
Subjt:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV

Query:  KKLLDSVPNKYLPIIAGIEQ
        KKLLDSVP+KYLPI+AGIEQ
Subjt:  KKLLDSVPNKYLPIIAGIEQ

XP_042415668.1 uncharacterized protein LOC122004893 [Zingiber officinale]2.33e-5880Show/hide
Query:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV
        A+V+AKKDK ARAYILQC+P+D++LQIA KKTAKE+WDSLK +YLGS+RVK ARVQTLK EFD L+MKETETIDEFAGK+S L+SKFSTLGV LEDSSLV
Subjt:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV

Query:  KKLLDSVPNKYLPIIAGIEQ
        KKLLDSVP+K+ PI+AGIEQ
Subjt:  KKLLDSVPNKYLPIIAGIEQ

XP_042466020.1 uncharacterized protein LOC122048530 [Zingiber officinale]3.03e-5879.17Show/hide
Query:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV
        A+V+AKKDK ARAYILQC+P+D+LLQIA KKTAKE+WD+LK +YLGS+RVK ARVQTLK EFD L+MKETETIDEFAGK+S L+SKFSTLG  LEDSSLV
Subjt:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV

Query:  KKLLDSVPNKYLPIIAGIEQ
        KKLLDSVP+K+ PI+AGIEQ
Subjt:  KKLLDSVPNKYLPIIAGIEQ

TrEMBL top hitse value%identityAlignment
A0A5A7SWG6 Uncharacterized protein3.9e-67100Show/hide
Query:  MKEAKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDS
        MKEAKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDS
Subjt:  MKEAKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDS

Query:  SLVKKLLDSVPNKYLPIIAGIEQSKISTPCHLKKRSDE
        SLVKKLLDSVPNKYLPIIAGIEQSKISTPCHLKKRSDE
Subjt:  SLVKKLLDSVPNKYLPIIAGIEQSKISTPCHLKKRSDE

A0A5D3B9D8 Uncharacterized protein3.2e-3780Show/hide
Query:  ARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKKLLDSVPNK
        A  YILQCIPKDVLLQIA+KKTAK+IWDSLK +YLGS++VKMARVQTLK  FDVL+MKETETI+EF  KI+ LASKFSTLGVALEDSSLVKKLLD V  K
Subjt:  ARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKKLLDSVPNK

Query:  YLPIIAGIEQ
        YLPI  GI+Q
Subjt:  YLPIIAGIEQ

A0A5N6MA89 Uncharacterized protein2.0e-3463.03Show/hide
Query:  VEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKK
        V+ KK K ARA++ Q IP+DVLLQ+AKKKTAKE+W+SLK +YLG++RV+ AR+ TLK EFD L+M+ETE+IDE+AGK+S + SK S+LG  LEDS +V+K
Subjt:  VEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKK

Query:  LLDSVPNKYLPIIAGIEQS
        LLD+VP+KYL ++A IEQ+
Subjt:  LLDSVPNKYLPIIAGIEQS

A0A5N6NYJ8 CCHC-type domain-containing protein2.0e-3460.83Show/hide
Query:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV
        A V+ KK+K +RA+I Q IP+DVLLQ+AKKKTAKEIWDSLK +Y+G++RV+ AR+ TLK EF++L+MKE E++DEFAGK++G+ +K+++LG  ++D  LV
Subjt:  AKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLV

Query:  KKLLDSVPNKYLPIIAGIEQ
        +KLLDSVP+KYL ++A IEQ
Subjt:  KKLLDSVPNKYLPIIAGIEQ

Q0JH75 Os01g0879800 protein3.3e-3466.95Show/hide
Query:  VEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKK
        V+ KKDK ARA +   +P+DVL QIAKKKTAKE+W+SLK ++LG ERVK ARVQTLK +F  L MK+TE+IDEFAGKISGLA+K S LGV ++D   VKK
Subjt:  VEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKK

Query:  LLDSVPNKYLPIIAGIEQ
        LLDSVP+K+L +IA IEQ
Subjt:  LLDSVPNKYLPIIAGIEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAGCCAAAGTAGAAGCAAAGAAGGACAAGAACGCGCGCGCATATATTCTTCAATGCATCCCGAAAGACGTGCTTCTACAAATTGCAAAGAAGAAGACCGCAAA
GGAAATATGGGATAGTCTCAAGGAGAAGTACTTGGGCAGCGAGCGGGTGAAGATGGCACGAGTTCAAACCTTGAAGAGAGAGTTTGATGTTCTTCAGATGAAGGAGACCG
AGACGATCGATGAGTTCGCAGGAAAAATCAGCGGTCTAGCAAGCAAGTTCTCCACCCTCGGTGTTGCACTTGAGGATTCATCGTTGGTCAAGAAGCTTCTCGACTCCGTC
CCTAACAAATATCTTCCCATTATCGCAGGAATCGAGCAATCCAAGATCTCCACACCATGCCATTTGAAGAAGCGATCGGACGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAGCCAAAGTAGAAGCAAAGAAGGACAAGAACGCGCGCGCATATATTCTTCAATGCATCCCGAAAGACGTGCTTCTACAAATTGCAAAGAAGAAGACCGCAAA
GGAAATATGGGATAGTCTCAAGGAGAAGTACTTGGGCAGCGAGCGGGTGAAGATGGCACGAGTTCAAACCTTGAAGAGAGAGTTTGATGTTCTTCAGATGAAGGAGACCG
AGACGATCGATGAGTTCGCAGGAAAAATCAGCGGTCTAGCAAGCAAGTTCTCCACCCTCGGTGTTGCACTTGAGGATTCATCGTTGGTCAAGAAGCTTCTCGACTCCGTC
CCTAACAAATATCTTCCCATTATCGCAGGAATCGAGCAATCCAAGATCTCCACACCATGCCATTTGAAGAAGCGATCGGACGAATGA
Protein sequenceShow/hide protein sequence
MKEAKVEAKKDKNARAYILQCIPKDVLLQIAKKKTAKEIWDSLKEKYLGSERVKMARVQTLKREFDVLQMKETETIDEFAGKISGLASKFSTLGVALEDSSLVKKLLDSV
PNKYLPIIAGIEQSKISTPCHLKKRSDE