; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023481 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023481
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr05:1073911..1078633
RNA-Seq ExpressionIVF0023481
SyntenyIVF0023481
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449708.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]9.58e-23298.25Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_008449711.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]1.99e-22596.78Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_011657641.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus]3.98e-22495.32Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_011657643.1 nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus]8.27e-21893.86Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_031743006.1 nuclear transcription factor Y subunit A-1 isoform X3 [Cucumis sativus]1.66e-21492.98Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLELVGHSI        DPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

TrEMBL top hitse value%identityAlignment
A0A0A0KEL9 Nuclear transcription factor Y subunit1.0e-17595.32Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A1S3BNK4 Nuclear transcription factor Y subunit1.7e-18198.25Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A1S4DXQ9 Nuclear transcription factor Y subunit1.2e-17696.78Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A5A7TER3 Nuclear transcription factor Y subunit3.4e-16691.81Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        + S S  VNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESND                      ASYGQVQNNCQHAVS
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A6J1JHB5 Nuclear transcription factor Y subunit4.4e-16692.15Show/hide
Query:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQNNCQHAV
        + S    VNQ ESEPPNMQQTSSYSEPWWRSIGYNHIS PAAGGN+SNSTSLEC NGASESNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQNNCQHAV
Subjt:  LDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQNNCQHAV

Query:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        SAAP VH GCITQPPQLELVGHSIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFH
        +RKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+K+KDSGSGQA SSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSYVNGS QFH
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFH

Query:  NYSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK
        NYSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Subjt:  NYSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.2e-2248.23Show/hide
Query:  HSIACASNPYQDPYYAGVMAAYGHQPYG--YPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR
        +S+A    PY DPYY  + A    QPY   +   +G+    + LP +  +EPVFVNAKQY GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR R
Subjt:  HSIACASNPYQDPYYAGVMAAYGHQPYG--YPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR

Query:  GSGGRF--AKKNETNSLGSTMKDKDS-GSGQAISSHSAGSS
        G GGRF  AKK + +   S+ ++K +  +G++  + S+G+S
Subjt:  GSGGRF--AKKNETNSLGSTMKDKDS-GSGQAISSHSAGSS

Q8VY64 Nuclear transcription factor Y subunit A-41.7e-2143.71Show/hide
Query:  PYQDPYYAGVMAAYGHQPYGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF
        PY DPYY  V A   + P+ YP      +GM    + L  +  +EPVFVNAKQY GILRRRQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF
Subjt:  PYQDPYYAGVMAAYGHQPYGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF

Query:  AKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQ
            + N      K+++  +    +S ++ S  SE     LA   +  NG+
Subjt:  AKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQ

Q945M9 Nuclear transcription factor Y subunit A-94.2e-4944.87Show/hide
Query:  SGVNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAP
        SG N+ +SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G   +  Q +     
Subjt:  SGVNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAP

Query:  IVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRK
         +H G    PP  +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E KLIK RK
Subjt:  IVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRK

Query:  PYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNYS
        PYLHESRHQHAMRR RG+GGRFAKK  TN+  S  K ++  +G    S S+ +S          E W                       NG  +     
Subjt:  PYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNYS

Query:  SFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK
          Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Subjt:  SFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK

Q9LXV5 Nuclear transcription factor Y subunit A-11.5e-5451.92Show/hide
Query:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQHAVSAAPIV---HSGCITQ
        +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V N+       A  +   H   + Q
Subjt:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQHAVSAAPIV---HSGCITQ

Query:  PPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQH
        PP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+H
Subjt:  PPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQH

Query:  AMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
        AMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  AMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

Q9SYH4 Nuclear transcription factor Y subunit A-51.4e-2038.51Show/hide
Query:  GQVQNNCQHAVSAAPIVHSGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILR
        G+   N   +++ + +V    +   P    +  S+ CA     N +  P YA    A  H        +G+  +R+ LP  + + EP+FVNAKQY  ILR
Subjt:  GQVQNNCQHAVSAAPIVHSGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILR

Query:  RRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQ--AISSHSAGS
        RR+ RAK E +NKLIK RKPYLHESRH HA++RARGSGGRF    +     +++      +GQ  ++S H  GS
Subjt:  RRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQ--AISSHSAGS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A93.0e-5044.87Show/hide
Query:  SGVNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAP
        SG N+ +SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G   +  Q +     
Subjt:  SGVNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAP

Query:  IVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRK
         +H G    PP  +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E KLIK RK
Subjt:  IVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRK

Query:  PYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNYS
        PYLHESRHQHAMRR RG+GGRFAKK  TN+  S  K ++  +G    S S+ +S          E W                       NG  +     
Subjt:  PYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNYS

Query:  SFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK
          Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Subjt:  SFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK

AT5G12840.1 nuclear factor Y, subunit A11.1e-5551.92Show/hide
Query:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQHAVSAAPIV---HSGCITQ
        +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V N+       A  +   H   + Q
Subjt:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQHAVSAAPIV---HSGCITQ

Query:  PPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQH
        PP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+H
Subjt:  PPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQH

Query:  AMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
        AMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  AMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

AT5G12840.2 nuclear factor Y, subunit A11.4e-5550.96Show/hide
Query:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS------AAPIVHSGCIT
        +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A+     +N  H +       +   +H   + 
Subjt:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS------AAPIVHSGCIT

Query:  QPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQ
        QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+
Subjt:  QPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQ

Query:  HAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
        HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  HAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

AT5G12840.3 nuclear factor Y, subunit A11.1e-5551.92Show/hide
Query:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQHAVSAAPIV---HSGCITQ
        +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V N+       A  +   H   + Q
Subjt:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQHAVSAAPIV---HSGCITQ

Query:  PPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQH
        PP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+H
Subjt:  PPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQH

Query:  AMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
        AMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  AMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

AT5G12840.4 nuclear factor Y, subunit A11.4e-5550.96Show/hide
Query:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS------AAPIVHSGCIT
        +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A+     +N  H +       +   +H   + 
Subjt:  MQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS------AAPIVHSGCIT

Query:  QPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQ
        QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+
Subjt:  QPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQ

Query:  HAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
        HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  HAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTCTCTCTCTCTCTATCTCTCAGTATGACAATCGCTCAACCACTGAATTGACTCTTCAACTCTTTCTTTTTTTCCTTGATTCTCTCAGCAGCGGTGTGAATCA
ACCAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCGGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCCCCGCCAGCAGCCGGAGGAAATGTGT
CCAATTCAACATCACTGGAATGCACCAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGATGATGATGATGACACCACAAAAGAT
TCACATGCAAGTTATGGGCAAGTACAGAACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATCACGCAGCCTCCTCAGCTTGAACTTGTAGG
CCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCAGGAGTGATGGCTGCCTATGGGCATCAACCGTATGGTTACCCTCCTTTTCTTGGGATGCCAC
ATGCTAGAATGGCGTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTT
GAGAACAAACTAATTAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAAC
TAATTCCTTGGGTTCTACTATGAAGGATAAGGACTCCGGTTCTGGTCAAGCTATCTCATCCCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCACTGTGCCTTGGCCG
AAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAATGGAAGTAGCCAATTTCATAATTACAGTAGC
TTCCAAGCTTCTTCCTATGGTTTGCGATCTGGTGAGAGAGGCGATGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCTCAGAGGCGTCTTGC
CATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCTCTCTCTCTCTCTATCTCTCAGTATGACAATCGCTCAACCACTGAATTGACTCTTCAACTCTTTCTTTTTTTCCTTGATTCTCTCAGCAGCGGTGTGAATCA
ACCAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCGGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCCCCGCCAGCAGCCGGAGGAAATGTGT
CCAATTCAACATCACTGGAATGCACCAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGATGATGATGATGACACCACAAAAGAT
TCACATGCAAGTTATGGGCAAGTACAGAACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATCACGCAGCCTCCTCAGCTTGAACTTGTAGG
CCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCAGGAGTGATGGCTGCCTATGGGCATCAACCGTATGGTTACCCTCCTTTTCTTGGGATGCCAC
ATGCTAGAATGGCGTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTT
GAGAACAAACTAATTAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAAC
TAATTCCTTGGGTTCTACTATGAAGGATAAGGACTCCGGTTCTGGTCAAGCTATCTCATCCCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCACTGTGCCTTGGCCG
AAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAATGGAAGTAGCCAATTTCATAATTACAGTAGC
TTCCAAGCTTCTTCCTATGGTTTGCGATCTGGTGAGAGAGGCGATGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCTCAGAGGCGTCTTGC
CATCAAGTGA
Protein sequenceShow/hide protein sequence
MLSLSLSISQYDNRSTTELTLQLFLFFLDSLSSGVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKD
SHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNYSS
FQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK