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IVF0023482 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023482
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:9751629..9751949
RNA-Seq ExpressionIVF0023482
SyntenyIVF0023482
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_013709367.1 uncharacterized protein LOC106413079 [Brassica napus]2.52e-2348.45Show/hide
Query:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        +GGKEV LK++    P YAMSC KL       +T AM+ FWW S +   +IHW+ W ++ L KDL G+ F++ E FNQALL NQAW + Q P +L+A
Subjt:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

XP_013709368.1 uncharacterized protein LOC106413080 [Brassica napus]2.45e-2348.45Show/hide
Query:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        +GGKEV LK++    P YAMSC KL       +T AM+ FWW S +   +IHW+ W ++ L KDL G+ F++ E FNQALL NQAW + Q P +L+A
Subjt:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

XP_018458646.1 PREDICTED: uncharacterized protein LOC108829491 [Raphanus sativus]7.88e-2450.53Show/hide
Query:  GKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        GKEVFLKS   +LP +AMSC +L   V  +++  M++FWW S +G K+IHWI W+ M LLK   GM F++ E FNQALL  Q W +   P +LLA
Subjt:  GKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

XP_019085587.1 PREDICTED: uncharacterized protein LOC109126474 [Camelina sativa]2.49e-2448.35Show/hide
Query:  FIGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQ
        F GGKE+ LKS+  T+P YAMSC KL       +T AM+ FWW S++  +++HWI WK + + K L G+ F++ ++FNQALL  QAW I Q
Subjt:  FIGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQ

XP_024033668.1 uncharacterized protein LOC112095767 [Citrus clementina]2.54e-2346.08Show/hide
Query:  SAISFIGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTL
        S++  IG KEV +K++ Q +PTYAMS  K+   +  ++ K +T FWW + D  K IHWI WK +   K   GM FR F+ FNQALL  Q W I Q P +L
Subjt:  SAISFIGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTL

Query:  LA
        +A
Subjt:  LA

TrEMBL top hitse value%identityAlignment
A0A1J3DD75 Putative mitochondrial protein (Fragment)1.8e-1952.08Show/hide
Query:  GGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        GGKEV LKS+   +P YAMSC KL   +  ++  AM  FWW S +  K+IHWI+W+ M L K L GM FR+   FNQALL  QAW I Q P +L+A
Subjt:  GGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

A0A1J3DQV4 Putative mitochondrial protein8.0e-2050Show/hide
Query:  GGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        GGKE  LKS+   +P YAMSC +L   +  ++ +AM  FWW S +  K+IHWI+W+ M L K+L GM FR+ E FNQALL  QAW + Q P +L+A
Subjt:  GGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

A0A6D2IE18 Reverse transcriptase domain-containing protein3.0e-1948.96Show/hide
Query:  GGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        GGKE+ LK++   LP YAMSC KL      ++++AM  FWW S D  ++IHWI+W+ M LLK L G+ F++ E FNQALL  QAW + Q P  L +
Subjt:  GGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

A0A803PIB6 Uncharacterized protein1.0e-1951.55Show/hide
Query:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        IGGKEV LK++ Q +PTYAMSC +L      ++   M  FWWGSS  NK+IHW NWK++   K   G+ FR+F  FNQA L  QAW I Q P +LL+
Subjt:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

A0A803QGT2 Uncharacterized protein2.3e-1952.58Show/hide
Query:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        IGGKEV LK++ Q++PTYAMSC +L   +  E+   M  FWWGSS  NK+IHW  W+ +   K   GM FR+F  FNQALL  QAW I Q P +LL+
Subjt:  IGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.4e-1342.86Show/hide
Query:  LPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLK-DLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        LP YAMSC +L   +  ++T AMT FWW S +  ++I W+ W+ +   K D  G+ FR+   FNQALL  Q++ I   P+TLL+
Subjt:  LPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLK-DLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-1034.94Show/hide
Query:  LPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        LPTY M+C  L   V  ++   +  FWW +    K +HW  W  +   K   G+ F++ E FN ALL  Q W +   P +L+A
Subjt:  LPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.7e-1442.86Show/hide
Query:  LPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLK-DLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA
        LP YAMSC +L   +  ++T AMT FWW S +  ++I W+ W+ +   K D  G+ FR+   FNQALL  Q++ I   P+TLL+
Subjt:  LPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLK-DLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAATGGAAGTGCAATTTCTTTTATTGGTGGTAAGGAAGTTTTTTTGAAGTCATTGAACCAAACTCTCCCTACTTATGCTATGTCATGTCTTAAACTCAAAAATTT
TGTTTGGATTGAGGTGACTAAAGCTATGACCCATTTTTGGTGGGGTTCTTCGGATGGGAATAAAGAAATCCATTGGATTAACTGGAAGACCATGTATTTACTGAAGGATT
TGAGTGGTATGAGGTTTAGGAATTTTGAAGTTTTCAATCAAGCACTTCTTACTAATCAAGCATGGTGTATCTGTCAATGTCCCTATACTCTATTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAATGGAAGTGCAATTTCTTTTATTGGTGGTAAGGAAGTTTTTTTGAAGTCATTGAACCAAACTCTCCCTACTTATGCTATGTCATGTCTTAAACTCAAAAATTT
TGTTTGGATTGAGGTGACTAAAGCTATGACCCATTTTTGGTGGGGTTCTTCGGATGGGAATAAAGAAATCCATTGGATTAACTGGAAGACCATGTATTTACTGAAGGATT
TGAGTGGTATGAGGTTTAGGAATTTTGAAGTTTTCAATCAAGCACTTCTTACTAATCAAGCATGGTGTATCTGTCAATGTCCCTATACTCTATTGGCTTGA
Protein sequenceShow/hide protein sequence
MLNGSAISFIGGKEVFLKSLNQTLPTYAMSCLKLKNFVWIEVTKAMTHFWWGSSDGNKEIHWINWKTMYLLKDLSGMRFRNFEVFNQALLTNQAWCICQCPYTLLA