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IVF0023483 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023483
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionABC transporter F family member 4
Genome locationchr11:29976637..29976834
RNA-Seq ExpressionIVF0023483
SyntenyIVF0023483
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGO86950.1 ATP-binding cassette transporter, partial [Silene nutans]4.63e-1388.89Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEF+GGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

GEW18594.1 ABC transporter F family member 4-like [Tanacetum cinerariifolium]9.88e-1388.89Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEF+GGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

KAA0039916.1 stress-associated endoplasmic reticulum protein 2-like [Cucumis melo var. makuwa]1.42e-12100Show/hide
Query:  PHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        PHILLLDEPTNHLDVQRTDALADALDEFSGGVV
Subjt:  PHILLLDEPTNHLDVQRTDALADALDEFSGGVV

KAF3582303.1 hypothetical protein DY000_02032710 [Brassica cretica]5.11e-1391.67Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEFSGGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

KAG2328998.1 hypothetical protein Bca52824_000178 [Brassica carinata]3.34e-1388.89Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADAL+EFSGGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

TrEMBL top hitse value%identityAlignment
A0A1J3DMT3 ABC transporter F family member 43.9e-0991.67Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEFSGGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

A0A1J3GVL4 ABC transporter F family member 43.9e-0991.67Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEFSGGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

A0A2N9GIW1 Uncharacterized protein3.9e-0991.67Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEFSGGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

A0A6D2K290 Uncharacterized protein3.9e-0991.67Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEFSGGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

M4DE88 Uncharacterized protein3.9e-0991.67Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEFSGGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

SwissProt top hitse value%identityAlignment
Q8T6B4 ABC transporter F family member 47.8e-0757.89Show/hide
Query:  SKPHILLLDEPTNHLDVQRTDALADALDEFSGGVVWLA
        ++PHILLLDEPTNHLD+   +ALA+ ++ F+GGVV ++
Subjt:  SKPHILLLDEPTNHLDVQRTDALADALDEFSGGVVWLA

Q99LE6 ATP-binding cassette sub-family F member 24.6e-0766.67Show/hide
Query:  PHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        PH+L LDEPTNHLD++  DALADA++EF GG++
Subjt:  PHILLLDEPTNHLDVQRTDALADALDEFSGGVV

Q9M1H3 ABC transporter F family member 42.3e-1188.89Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEF+GGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

Q9UG63 ATP-binding cassette sub-family F member 24.6e-0766.67Show/hide
Query:  PHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        PH+L LDEPTNHLD++  DALADA++EF GG++
Subjt:  PHILLLDEPTNHLDVQRTDALADALDEFSGGVV

Q9USH9 Uncharacterized ABC transporter ATP-binding protein C825.014.1e-0868.42Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVVWL
        M++PHILLLDEPTN LD+   DALADAL+ F GGVV++
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVVWL

Arabidopsis top hitse value%identityAlignment
AT1G64550.1 general control non-repressible 32.0e-0557.58Show/hide
Query:  KPHILLLDEPTNHLDVQRTDALADALDEFSGGV
        KPH+LLLDEP+NHLD+   +AL   L  F GG+
Subjt:  KPHILLLDEPTNHLDVQRTDALADALDEFSGGV

AT3G54540.1 general control non-repressible 41.7e-1288.89Show/hide
Query:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        MSKPHILLLDEPTNHLD+Q  DALADALDEF+GGVV
Subjt:  MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

AT5G09930.1 ABC transporter family protein6.3e-0448.65Show/hide
Query:  MSKPH-ILLLDEPTNHLDVQRTDALADALDEFSGGVV
        M KP  +L+LDEPTNHLD+   + L +A++E+ G V+
Subjt:  MSKPH-ILLLDEPTNHLDVQRTDALADALDEFSGGVV

AT5G60790.1 ABC transporter family protein2.8e-0761.76Show/hide
Query:  KPHILLLDEPTNHLDVQRTDALADALDEFSGGVV
        +P++LLLDEPTNHLD++  D+LA+AL+E+ GG+V
Subjt:  KPHILLLDEPTNHLDVQRTDALADALDEFSGGVV

AT5G64840.1 general control non-repressible 56.3e-0445Show/hide
Query:  ILLLDEPTNHLDVQRTDALADALDEFSGGVVWLAMIQDSY
        +L+LDEPTNHLD+   + L +A++E+ G V+  A+  D Y
Subjt:  ILLLDEPTNHLDVQRTDALADALDEFSGGVVWLAMIQDSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGCCTCACATATTACTGCTTGATGAACCTACAAATCACTTAGATGTGCAACGTACTGATGCATTAGCAGATGCCTTAGATGAATTCAGTGGTGGAGTCGTTTG
GTTAGCCATGATTCAAGACTCATATCAAGTGTGTGTGAGGATGAAGAAAAAAGTGAAATTTGGGTGGGTTGAAAACTTGAAATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGCCTCACATATTACTGCTTGATGAACCTACAAATCACTTAGATGTGCAACGTACTGATGCATTAGCAGATGCCTTAGATGAATTCAGTGGTGGAGTCGTTTG
GTTAGCCATGATTCAAGACTCATATCAAGTGTGTGTGAGGATGAAGAAAAAAGTGAAATTTGGGTGGGTTGAAAACTTGAAATGGTAG
Protein sequenceShow/hide protein sequence
MSKPHILLLDEPTNHLDVQRTDALADALDEFSGGVVWLAMIQDSYQVCVRMKKKVKFGWVENLKW