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IVF0023495 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023495
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:18703208..18703375
RNA-Seq ExpressionIVF0023495
SyntenyIVF0023495
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025857.1 retrotransposon protein [Cucumis melo var. makuwa]4.78e-2998.18Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDL ESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
KAA0056435.1 retrotransposon protein [Cucumis melo var. makuwa]8.20e-30100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]3.75e-2992.73Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYC+DVDDEDEGDSTY TTTASEDIQYIETTNEWSQW DDL ESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]3.21e-3094.55Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYCDD+DDEDEGDSTYATTTASEDIQYIETTNEWSQW DDL ESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]3.61e-2990.91Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYCD+VDD+DEGDSTYATTTASEDIQYIETTNEWSQW DDL ESMFTEWQLRN 
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SMB5 Retrotransposon protein8.9e-2398.18Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDL ESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
A0A5A7SZ61 Retrotransposon protein7.5e-2296.36Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQW DDLVESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
A0A5A7U4G2 Retrotransposon protein2.6e-2296.36Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYC+DVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDL ESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
A0A5A7USE5 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
A0A5D3CHC3 Retrotransposon protein7.5e-2294.55Show/hide
Query:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
        MTYC+DV+DEDEGDSTYATTTASEDIQYIETTNEWSQWHDDL ESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCTACATACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCACGACGACCTAGTCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCTACATACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCACGACGACCTAGTCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWHDDLVESMFTEWQLRNA