; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023519 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023519
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr04:18363641..18363805
RNA-Seq ExpressionIVF0023519
SyntenyIVF0023519
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058105.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.35e-1382.93Show/hide
Query:  MVEGENSNDRSGGGGRKRRRWWKEKTAEVDRLVEGENDNDG
        M+EGEN NDRSGGGGR RRRWWK  TAE+DRLVEGEN NDG
Subjt:  MVEGENSNDRSGGGGRKRRRWWKEKTAEVDRLVEGENDNDG
KAA0065564.1 hypothetical protein E6C27_scaffold90G00010 [Cucumis melo var. makuwa]2.35e-0455.56Show/hide
Query:  WWKEKTAEVDRLVEGENDNDGR---------WWRER
        WW+EKTA +DR+VEGEND+DG          WWRE+
Subjt:  WWKEKTAEVDRLVEGENDNDGR---------WWRER
TrEMBL top hitse value%identityAlignment
A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein7.7e-1182.93Show/hide
Query:  MVEGENSNDRSGGGGRKRRRWWKEKTAEVDRLVEGENDNDG
        M+EGEN NDRSGGGGR RRRWWK  TAE+DRLVEGEN NDG
Subjt:  MVEGENSNDRSGGGGRKRRRWWKEKTAEVDRLVEGENDNDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGGAGAAAACAGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGACGACGATGGTGGAAGGAGAAAACGGCTGAGGTCGATCGGTTGGTGGAGGGAGAAAA
TGACAATGATGGTAGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGGGAGAAAACAGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGACGACGATGGTGGAAGGAGAAAACGGCTGAGGTCGATCGGTTGGTGGAGGGAGAAAA
TGACAATGATGGTAGATGGTGGAGGGAGAGAACGGCTGAGGTCGGACGACTTTGA
Protein sequenceShow/hide protein sequence
MVEGENSNDRSGGGGRKRRRWWKEKTAEVDRLVEGENDNDGRWWRERTAEVGRL