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IVF0023536 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023536
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent DNA helicase RecQ-like
Genome locationchr08:9243011..9243277
RNA-Seq ExpressionIVF0023536
SyntenyIVF0023536
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041750.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]5.08e-1556.79Show/hide
Query:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
        NT  KGKDV  +EEEIPS RTS   +MA EE+MV LNDR      I E +A  LEVAL A  Q+QE   GN Q  E+WCIA
Subjt:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
KAA0054551.1 reverse transcriptase [Cucumis melo var. makuwa]1.70e-1969.57Show/hide
Query:  MKG-AVTDKNTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTA
        MKG AVT KNT DKGKDVV  E+EIPSPRTS  RLM +EES V + DR G+L  I ERLARRLE AL A
Subjt:  MKG-AVTDKNTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTA
TYK27040.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]5.07e-1556.79Show/hide
Query:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
        NT  KGKDV  +EEEIPS RTS   +MA EE+MV LNDR      I E +A  LEVAL A  Q+QE   GN Q  E+WCIA
Subjt:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
TrEMBL top hitse value%identityAlignment
A0A5A7TEL7 ATP-dependent DNA helicase RecQ-like1.5e-1156.79Show/hide
Query:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
        NT  KGKDV  +EEEIPS RTS   +MA EE+MV LNDR      I E +A  LEVAL A  Q+QE   GN Q  E+WCIA
Subjt:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
A0A5A7ULZ0 Reverse transcriptase4.6e-1369.57Show/hide
Query:  MKG-AVTDKNTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTA
        MKG AVT KNT DKGKDVV  E+EIPSPRTS  RLM +EES V + DR G+L  I ERLARRLE AL A
Subjt:  MKG-AVTDKNTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTA
A0A5D3DUQ9 ATP-dependent DNA helicase RecQ-like1.5e-1156.79Show/hide
Query:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
        NT  KGKDV  +EEEIPS RTS   +MA EE+MV LNDR      I E +A  LEVAL A  Q+QE   GN Q  E+WCIA
Subjt:  NTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQ--ELWCIA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAGCTGTAACCGACAAGAACACCTTCGACAAGGGAAAGGATGTAGTGCCTAATGAAGAAGAGATCCCATCCCCACGCACTTCGACTACCCGATTGATGGCCAT
TGAAGAAAGCATGGTATACCTTAACGACCGAAATGGAAATCTTGTAACCATCAAGGAAAGACTTGCTCGCCGACTTGAAGTAGCGTTGACTGCCCATTTCCAGCAGCAAG
AAATCGTCAACGGCAACCACCAAGAACTCTGGTGCATTGCCGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGAGCTGTAACCGACAAGAACACCTTCGACAAGGGAAAGGATGTAGTGCCTAATGAAGAAGAGATCCCATCCCCACGCACTTCGACTACCCGATTGATGGCCAT
TGAAGAAAGCATGGTATACCTTAACGACCGAAATGGAAATCTTGTAACCATCAAGGAAAGACTTGCTCGCCGACTTGAAGTAGCGTTGACTGCCCATTTCCAGCAGCAAG
AAATCGTCAACGGCAACCACCAAGAACTCTGGTGCATTGCCGGTTGA
Protein sequenceShow/hide protein sequence
MKGAVTDKNTFDKGKDVVPNEEEIPSPRTSTTRLMAIEESMVYLNDRNGNLVTIKERLARRLEVALTAHFQQQEIVNGNHQELWCIAG