| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043398.1 retrotransposon protein [Cucumis melo var. makuwa] | 2.83e-22 | 50.96 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPK-ERGEASGMCM----------NDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
+S+DDVRASRP+RAS GR + K +RG + N+QLR I +WPAR LAND HVR EF R+LRE +L+SLDR L +R L+SRMD++
Subjt: MSKDDVRASRPARASNGRADRANPK-ERGEASGMCM----------NDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: RAGV
R V
Subjt: RAGV
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| KAA0050190.1 retrotransposon protein [Cucumis melo var. makuwa] | 3.41e-25 | 55.45 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPKERGEASGM-----------CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
MS++DVRASRP+ S GR + K + E+ C NDQLRTI +WPARALANDTHVRQE LRLL +L+SLDR LC+R L+SRMD+M
Subjt: MSKDDVRASRPARASNGRADRANPKERGEASGM-----------CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: R
R
Subjt: R
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| KAA0050806.1 retrotransposon protein [Cucumis melo var. makuwa] | 1.69e-23 | 55 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPK------ERGEASGM-----CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
MS++DV AS+PA SN RA + K ++GE + CMNDQL+ IV+W ARALAN+THV QEF+RLLRE +LS+LDRALC+R L+S MD+M
Subjt: MSKDDVRASRPARASNGRADRANPK------ERGEASGM-----CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
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| KAA0052252.1 retrotransposon protein [Cucumis melo var. makuwa] | 1.78e-44 | 79.05 | Show/hide |
Query: MSKDDVRASRPARASNGRA--DRANPKERGEASGM---------CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
MSKDDVRASRPARASNGRA ++ K R + G CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Subjt: MSKDDVRASRPARASNGRA--DRANPKERGEASGM---------CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: RAGVS
RAGVS
Subjt: RAGVS
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| KAA0053857.1 retrotransposon protein [Cucumis melo var. makuwa] | 2.00e-22 | 53.85 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPK-ERG-------EASGMCM---NDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
+S+DDVRASRP+RAS+GR + K +RG EA + + N+QLR I +WPAR LAND HVR EF R+LRE +L+SLDRAL +R L+SRMD++
Subjt: MSKDDVRASRPARASNGRADRANPK-ERG-------EASGMCM---NDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: RAGV
R V
Subjt: RAGV
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U4I8 Retrotransposon protein | 1.3e-18 | 55.45 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPKERGEASGM-----------CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
MS++DVRASRP+ S GR + K + E+ C NDQLRTI +WPARALANDTHVRQE LRLL +L+SLDR LC+R L+SRMD+M
Subjt: MSKDDVRASRPARASNGRADRANPKERGEASGM-----------CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: R
R
Subjt: R
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| A0A5A7U929 Retrotransposon protein | 2.8e-32 | 79.05 | Show/hide |
Query: MSKDDVRASRPARASNGRA--DRANPKERGEASG---------MCMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
MSKDDVRASRPARASNGRA ++ K R + G CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Subjt: MSKDDVRASRPARASNGRA--DRANPKERGEASG---------MCMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: RAGVS
RAGVS
Subjt: RAGVS
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| A0A5A7U9D5 Retrotransposon protein | 4.3e-17 | 55 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPK------ERGEASGM-----CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
MS++DV AS+PA SN RA + K ++GE + CMNDQL+ IV+W ARALAN+THV QEF+RLLRE +LS+LDRALC+R L+S MD+M
Subjt: MSKDDVRASRPARASNGRADRANPK------ERGEASGM-----CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
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| A0A5D3BQI7 Retrotransposon protein | 3.6e-16 | 52.88 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPKER------GEASGM-----CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
+S+DDVR S+PA S+GR + K + GE + CMNDQLRTI++WP R AN+T VRQEFLRLL E DLSSLDR LC+RQL+ +D+M
Subjt: MSKDDVRASRPARASNGRADRANPKER------GEASGM-----CMNDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: RAGV
R+ V
Subjt: RAGV
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| A0A5D3D635 Retrotransposon protein | 3.6e-16 | 53.85 | Show/hide |
Query: MSKDDVRASRPARASNGRADRANPK-ERG-------EASGMCM---NDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
+S+DDVRASRP+RAS GR + K +RG EA + + N+QLR I KWPAR LAND HVR EF R++RE +L+SLDRAL +R L+SRMD++
Subjt: MSKDDVRASRPARASNGRADRANPK-ERG-------EASGMCM---NDQLRTIVKWPARALANDTHVRQEFLRLLRETLDLSSLDRALCERQLISRMDNM
Query: RAGV
R V
Subjt: RAGV
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