; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023568 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023568
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionplastid transcriptionally active 6
Genome locationchr07:6444089..6446972
RNA-Seq ExpressionIVF0023568
SyntenyIVF0023568
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]4.62e-24399.7Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.60e-23095.27Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSLPYRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAA-GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAA GS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAA-GSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]1.25e-245100Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]9.06e-23997.03Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPPPTINRLR SSIS+A SLPHLPSLPY K+TP ASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]5.24e-23897.33Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+S PL P TINRLRASSISAA+SLPHLPSLPYRKSTPS SPLF PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876131.4e-190100Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5A7UA32 Uncharacterized protein4.4e-18999.7Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5J5BWI0 Uncharacterized protein6.9e-14275.96Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        M +T+ L   PL PP     +   ++  TSL   P+L +    P  + +F PR + FRV++DDGD D GGPDDYDMD+EE+EEVDNKKD+D+EYDPLAAA
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AA+A G  G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP+VLAP+PQKYIRCA+
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR+RDR+ DLLV+RDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        +R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425721.0e-17794.41Show/hide
Query:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSL YRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---

Query:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770764.1e-17994.74Show/hide
Query:  MNSTVFLLS--LPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-
        MNSTVFLLS  LPLPP TI+RLR  SISAA+SLPHLPSLPYRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L 
Subjt:  MNSTVFLLS--LPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-

Query:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
          AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic1.8e-13475.08Show/hide
Query:  SISAATSLPHLPSLPYR-----KSTPSASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ + TS P  PS   R     ++    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISAATSLPHLPSLPYR-----KSTPSASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAP
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRARVLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFSISNWF
        TR+DME+HLRKLRDFS+SNWF
Subjt:  TRQDMERHLRKLRDFSISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 61.2e-13575.08Show/hide
Query:  SISAATSLPHLPSLPYR-----KSTPSASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ + TS P  PS   R     ++    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISAATSLPHLPSLPYR-----KSTPSASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAP
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRARVLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFSISNWF
        TR+DME+HLRKLRDFS+SNWF
Subjt:  TRQDMERHLRKLRDFSISNWF

AT1G21600.2 plastid transcriptionally active 61.2e-13575.08Show/hide
Query:  SISAATSLPHLPSLPYR-----KSTPSASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ + TS P  PS   R     ++    +PL L  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISAATSLPHLPSLPYR-----KSTPSASPLFLPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAP
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRARVLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFSISNWF
        TR+DME+HLRKLRDFS+SNWF
Subjt:  TRQDMERHLRKLRDFSISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGTCTTCCTCCTCTCCTTGCCGTTGCCGCCGCCCACAATCAACCGTCTCCGAGCCTCCTCCATCTCCGCCGCAACCTCTCTTCCCCACCTCCCAAGCCT
GCCCTACAGGAAATCCACTCCCTCTGCATCTCCTCTCTTCCTCCCTAGAAGAAACCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGTGGTCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCGGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTC
GGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAATTTCATAAGAT
TAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCCGATAATGATGTTTATGATTTCAGAGAGATGTACGTTACTCCTCCAGATACTGATGTTTATGCCA
TCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCTATTGATGCACCTAGAGATCCATTA
TACAAGTCCGAAAAGGAGGTTCTTAAGGTTTTCTTGACGAAGCACTTCAGAAACCGAAGGCTGCGGGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAGTCAATCACCAGGGCAAGAGTCCTGGTAACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTTGTAGTTCGAGACAACGGGAACTCTT
TCAAGATCATCCATTCGAGTGAACGAGATGACCCGACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGAC
TTCAGCATTTCAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
CACCTGACAGGATCCATCAACGGACTCAACATAAGAGCGTTCGAATTCTCCGGCGGCCGCTTCACAGAGTTCGCGTCCTCATGAACTCCACCGTCTTCCTCCTCTCCTTG
CCGTTGCCGCCGCCCACAATCAACCGTCTCCGAGCCTCCTCCATCTCCGCCGCAACCTCTCTTCCCCACCTCCCAAGCCTGCCCTACAGGAAATCCACTCCCTCTGCATC
TCCTCTCTTCCTCCCTAGAAGAAACCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGTGGTCCCGATGACTACGACATGGACGACGAGGAAATGGAGGAAG
TCGACAACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCGGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGC
AAAAGCTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAATTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAG
GAAGCCGCCGGATCCCGATAATGATGTTTATGATTTCAGAGAGATGTACGTTACTCCTCCAGATACTGATGTTTATGCCATCCCCAAAGTTCTTGCTCCAATGCCTCAGA
AGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCTATTGATGCACCTAGAGATCCATTATACAAGTCCGAAAAGGAGGTTCTTAAGGTT
TTCTTGACGAAGCACTTCAGAAACCGAAGGCTGCGGGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACCAAGTCAATCACCAGGGCAAG
AGTCCTGGTAACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTTGTAGTTCGAGACAACGGGAACTCTTTCAAGATCATCCATTCGAGTGAACGAGATG
ACCCGACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGACTTCAGCATTTCAAATTGGTTTTAAACAACA
CCATTCAACCTGCAAAAGTCGTCTCAGAATCCTCATCTCTTTAGAAGTGAGGACAAGAAATGTGATTCCAAAGTTTTAAGCATGATTTGGACGGCCAACTTACCTGTCAA
GATGATTCTCTCGTGCGAGTTCTCAACGTATCTCCTGCCTGTGCTCTTGTGATCGGTATTGAGTTCCTTTATGGCTAGTTTGCACTTGCAATGATTGTTCTTGATTCAAT
TCTACTCACTTTCAATTCTCGTCACGAGATAAGAGTCAATTAATCTAGGAGAGGGGTAGTTTTTTTTTGTAGATTTGTAATGCTGATAGAATTCACAAAAGCTATTGACA
TGTAAGGAGAAAACAAAACAAAACTGTATGAGGGCTTCTAGCTAGCTTCCAATGAGAGTATTTTCTATTGTTAGTAGTGAAACTTTTGAGCGTCAAGGATCCGAATAATG
TCATAATTGTTGATTTATGCCTATTTGGCACTATATAAAATATTGAAAAAAAAAGATATATGTGAAAAACCCAAAA
Protein sequenceShow/hide protein sequence
MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGV
GDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPL
YKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRD
FSISNWF