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IVF0023590 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023590
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol
Genome locationtig00000084_ERROPOS800000:401006..401376
RNA-Seq ExpressionIVF0023590
SyntenyIVF0023590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]3.89e-6178.86Show/hide
Query:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM
        MWDFDRITD VCDPFTPIEDEIKNLEDVSLVPVGSPRK+   +++    L+           THPPSPPKETSKQHDTAKESD+KDEYFKFIENNFGKPM
Subjt:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM

Query:  RDGFEDMFQCQANFQESQLRSEK
        RDGFEDMFQCQANFQESQLRS+K
Subjt:  RDGFEDMFQCQANFQESQLRSEK

KAA0047490.1 hypothetical protein E6C27_scaffold498G001090 [Cucumis melo var. makuwa]9.28e-1281.58Show/hide
Query:  DEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK
        DEYFKFI+NNFGKPMRDGFED+FQCQAN QE  +RS+K
Subjt:  DEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK

KAA0067817.1 hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]2.51e-1247.5Show/hide
Query:  CDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKF
        C+   P++DEIK+ +D  LVPVGSPRK+   + +    L+           T+PPSPPK+ SKQ DT KESD++DEY KF
Subjt:  CDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKF

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]5.76e-6381.3Show/hide
Query:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM
        MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRK+   +++    L+           THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM
Subjt:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM

Query:  RDGFEDMFQCQANFQESQLRSEK
        RDGFEDMFQCQANFQESQLRSEK
Subjt:  RDGFEDMFQCQANFQESQLRSEK

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]9.28e-1281.58Show/hide
Query:  DEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK
        DEYFKFI+NNFGKPMRDGFED+FQCQAN QE  +RS+K
Subjt:  DEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein2.4e-4678.86Show/hide
Query:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM
        MWDFDRITD VCDPFTPIEDEIKNLEDVSLVPVGSPRK+   +++    L+           THPPSPPKETSKQHDTAKESD+KDEYFKFIENNFGKPM
Subjt:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM

Query:  RDGFEDMFQCQANFQESQLRSEK
        RDGFEDMFQCQANFQESQLRS+K
Subjt:  RDGFEDMFQCQANFQESQLRSEK

A0A5A7TJU0 Uncharacterized protein8.7e-0935.43Show/hide
Query:  DRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLL-----------MTHFLRTHPPSPPKET-------SKQHDTAKESDEKDE-YFKFIENNF
        D + D +CD    I D  K  E+ +L  V    K    + +                +T  PSPPK++       +KQ +  ++ D+ DE YFKFI  N 
Subjt:  DRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLL-----------MTHFLRTHPPSPPKET-------SKQHDTAKESDEKDE-YFKFIENNF

Query:  GKPMRDGFEDMFQCQANFQESQLRSEK
         +P+R GFED+FQCQAN QE+QL+++K
Subjt:  GKPMRDGFEDMFQCQANFQESQLRSEK

A0A5A7VKU1 Uncharacterized protein1.8e-0940.19Show/hide
Query:  CDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKF--IENNFG--KPMRDGFEDM
        C+   P++DEIK+ +D  LVPVGSPRK+   + +    L+           T+PPSPPK+ SKQ DT KESD++DEY KF  IE++    K   +  +  
Subjt:  CDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKF--IENNFG--KPMRDGFEDM

Query:  FQCQANF
         Q    F
Subjt:  FQCQANF

A0A5D3D8Q5 Uncharacterized protein9.6e-4881.3Show/hide
Query:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM
        MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRK+   +++    L+           THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM
Subjt:  MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLR-----------THPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPM

Query:  RDGFEDMFQCQANFQESQLRSEK
        RDGFEDMFQCQANFQESQLRSEK
Subjt:  RDGFEDMFQCQANFQESQLRSEK

A0A5D3E1H0 Uncharacterized protein8.7e-0935.43Show/hide
Query:  DRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLL-----------MTHFLRTHPPSPPKET-------SKQHDTAKESDEKDE-YFKFIENNF
        D + D +CD    I D  K  E+ +L  V    K    + +                +T  PSPPK++       +KQ +  ++ D+ DE YFKFI  N 
Subjt:  DRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLL-----------MTHFLRTHPPSPPKET-------SKQHDTAKESDEKDE-YFKFIENNF

Query:  GKPMRDGFEDMFQCQANFQESQLRSEK
         +P+R GFED+FQCQAN QE+QL+++K
Subjt:  GKPMRDGFEDMFQCQANFQESQLRSEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGATTTTGATCGCATTACAGATTTAGTTTGCGATCCTTTTACCCCAATCGAAGACGAAATTAAGAATCTAGAAGATGTATCCCTAGTTCCTGTTGGGTCACCTAG
AAAAAAGTCTTGGAGAAGGTTGTTGATGACCCACTTCTTAAGGACACACCCTCCTTCGCCGCCTAAGGAAACAAGCAAACAACATGACACTGCGAAGGAAAGTGATGAAA
AAGATGAGTACTTTAAATTCATAGAGAACAACTTTGGAAAACCAATGCGAGATGGATTTGAAGACATGTTCCAATGTCAAGCTAACTTCCAAGAAAGTCAATTGAGAAGT
GAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGATTTTGATCGCATTACAGATTTAGTTTGCGATCCTTTTACCCCAATCGAAGACGAAATTAAGAATCTAGAAGATGTATCCCTAGTTCCTGTTGGGTCACCTAG
AAAAAAGTCTTGGAGAAGGTTGTTGATGACCCACTTCTTAAGGACACACCCTCCTTCGCCGCCTAAGGAAACAAGCAAACAACATGACACTGCGAAGGAAAGTGATGAAA
AAGATGAGTACTTTAAATTCATAGAGAACAACTTTGGAAAACCAATGCGAGATGGATTTGAAGACATGTTCCAATGTCAAGCTAACTTCCAAGAAAGTCAATTGAGAAGT
GAAAAATAG
Protein sequenceShow/hide protein sequence
MWDFDRITDLVCDPFTPIEDEIKNLEDVSLVPVGSPRKKSWRRLLMTHFLRTHPPSPPKETSKQHDTAKESDEKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRS
EK