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IVF0023651 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023651
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPyridoxal-phosphate-dependent serine hydroxymethyltransferase
Genome locationchr06:19950740..19951091
RNA-Seq ExpressionIVF0023651
SyntenyIVF0023651
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046981.1 Pyridoxal-phosphate-dependent serine hydroxymethyltransferase [Cucumis melo var. makuwa]4.28e-62100Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPKYFELRVW
        MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPKYFELRVW
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPKYFELRVW

KAA0047169.1 zinc finger CCHC domain-containing protein 5-like [Cucumis melo var. makuwa]1.06e-1843.97Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKY-----------------------FSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGF
        MTIAE+EKKF +LAKY +PFIMDE++K+                       F ++VEAA+RVENTL E      G++S  +++KGKGS+ GFS++ K+  
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKY-----------------------FSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGF

Query:  SQRSHWDDDRHPKYFE
         Q S WD++R P  FE
Subjt:  SQRSHWDDDRHPKYFE

KAA0051333.1 chromo domain protein [Cucumis melo var. makuwa]1.90e-1042.71Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGK------RSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPK
        MT+A+Y KKFIELAKY + FI+DE++KY+S+LVE+ +RV+ +L +     + +      ++S    K KG +   SKQ +  FSQ S+  DDR  K
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGK------RSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPK

KAA0061175.1 Gag protease polyprotein [Cucumis melo var. makuwa]2.81e-1147.56Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS
        MT+ EYEK+FI L KY +PFI+DE++K+     EAA+RVE+ L +E  S  GK+ +A LS+GKG  + F S + K   S+R+
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS

TYK29935.1 Gag protease polyprotein [Cucumis melo var. makuwa]2.03e-1147.56Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS
        MT+ EYEK+FI L KY +PFI+DE++K+     EAA+RVE+ L +E  S  GK+ +A LS+GKG  + F S + K   S+R+
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS

TrEMBL top hitse value%identityAlignment
A0A5A7U111 Zinc finger CCHC domain-containing protein 5-like1.6e-1443.97Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKY-----------------------FSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGF
        MTIAE+EKKF +LAKY +PFIMDE++K+                       F ++VEAA+RVENTL E      G++S  +++KGKGS+ GFS++ K+  
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKY-----------------------FSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGF

Query:  SQRSHWDDDRHPKYFE
         Q S WD++R P  FE
Subjt:  SQRSHWDDDRHPKYFE

A0A5A7V5R3 Retrotrans_gag domain-containing protein1.1e-0750Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQ
        MTIAEYE+KF +LAKY +  IMD+++K      + A+RV NT   EG++S  KR SA++SK KG+D GF+++
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQ

A0A5A7V5T0 Gag protease polyprotein9.9e-0947.56Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS
        MT+ EYEK+FI L KY +PFI+DE++K+     EAA+RVE+ L +E  S  GK+ +A LS+GKG  + F S + K   S+R+
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS

A0A5D3C0M5 Pyridoxal-phosphate-dependent serine hydroxymethyltransferase1.2e-46100Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPKYFELRVW
        MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPKYFELRVW
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPKYFELRVW

A0A5D3E3Q9 Gag protease polyprotein7.6e-0947.56Show/hide
Query:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS
        MT+ EYEK+FI L KY +PFI+DE++K+     EAA+RVE+ L +E  S  GK+ +A LS+GKG  + F S + K   S+R+
Subjt:  MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGF-SKQAKYGFSQRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATCGCGGAATATGAGAAGAAGTTCATTGAGCTCGCGAAGTACACAATGCCCTTTATAATGGATGAAGACAATAAGTACTTCTCTCAGTTGGTAGAGGCTGCTAT
CCGCGTTGAGAATACATTGGCGGAAGAGGGAAGGAGTTCATTAGGAAAGAGGTCAAGTGCGGATCTGAGTAAAGGAAAAGGAAGTGATGTAGGATTTAGTAAGCAAGCTA
AATATGGCTTTAGTCAAAGATCGCATTGGGATGACGATCGACATCCCAAGTACTTCGAGCTTCGAGTATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTATCGCGGAATATGAGAAGAAGTTCATTGAGCTCGCGAAGTACACAATGCCCTTTATAATGGATGAAGACAATAAGTACTTCTCTCAGTTGGTAGAGGCTGCTAT
CCGCGTTGAGAATACATTGGCGGAAGAGGGAAGGAGTTCATTAGGAAAGAGGTCAAGTGCGGATCTGAGTAAAGGAAAAGGAAGTGATGTAGGATTTAGTAAGCAAGCTA
AATATGGCTTTAGTCAAAGATCGCATTGGGATGACGATCGACATCCCAAGTACTTCGAGCTTCGAGTATGGTAA
Protein sequenceShow/hide protein sequence
MTIAEYEKKFIELAKYTMPFIMDEDNKYFSQLVEAAIRVENTLAEEGRSSLGKRSSADLSKGKGSDVGFSKQAKYGFSQRSHWDDDRHPKYFELRVW