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IVF0023662 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023662
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionKirola-like
Genome locationchr06:15074079..15074581
RNA-Seq ExpressionIVF0023662
SyntenyIVF0023662
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006810 - transport (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025959.1 reverse transcriptase [Cucumis melo var. makuwa]1.52e-2683.33Show/hide
Query:  IHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASSSLRIAQQ
        I+VL PSS+RPPPLLQSN YVLPPTDLSYHLDV+NPQI S+F VG+PWAH+NPNVQASSSL IAQQ
Subjt:  IHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASSSLRIAQQ

KAA0041480.1 kirola-like [Cucumis melo var. makuwa]1.54e-3169.47Show/hide
Query:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ
        AH V+ L  DLTVPP SS VACSVP+VPIHVL P+S RPP LLQSN Y LPP DLSYH DV+NPQIHS+F+VG+   H NPN+QASS S  I+QQ
Subjt:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ

KAA0060328.1 kirola-like [Cucumis melo var. makuwa]5.74e-4968.66Show/hide
Query:  MEIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILHNFSSPHTTIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS---SNR
        MEIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILHNFSS                       PP +S       H P+  L+     SNR
Subjt:  MEIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILHNFSSPHTTIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS---SNR

Query:  PPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKV
        PPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKV
Subjt:  PPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKV

TYK24354.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]4.64e-3069.47Show/hide
Query:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ
        AH V+ L  DLTVPP SS VACSVP+VPIHVL P+S RPP LLQSN Y LPP DLSYH DV+NPQIHS+F+VG+   H NPN+QASS S  I+QQ
Subjt:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ

XP_016902631.1 PREDICTED: uncharacterized protein LOC107991791 [Cucumis melo]2.18e-3045.22Show/hide
Query:  EIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILH---NFSSPHT----TIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS
        +I++     S + A V + DA I+  M +W CH+Q T  N+I     +F+SPH     + R +  AH ++ + A+ ++PP SSS   +V HVP+HVL P+
Subjt:  EIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILH---NFSSPHT----TIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS

Query:  SNRPPPLL-QSNSYVLPPTDL----SYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS
        S +PP LL QSN Y +PPT+     SYH  + NPQIHS F+VG+  AHSNPNVQASS
Subjt:  SNRPPPLL-QSNSYVLPPTDL----SYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS

TrEMBL top hitse value%identityAlignment
A0A1S4E325 uncharacterized protein LOC1079917911.7e-2345.22Show/hide
Query:  EIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNII---LHNFSSPHT----TIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS
        +I++     S + A V + DA I+  M +W CH+Q T  N+I     +F+SPH     + R +  AH ++ + A+ ++PP SSS   +V HVP+HVL P+
Subjt:  EIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNII---LHNFSSPHT----TIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS

Query:  SNRPPP-LLQSNSYVLPPTDL----SYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS
        S +PP  LLQSN Y +PPT+     SYH  + NPQIHS F+VG+  AHSNPNVQASS
Subjt:  SNRPPP-LLQSNSYVLPPTDL----SYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS

A0A5A7SL26 Reverse transcriptase3.2e-2283.33Show/hide
Query:  IHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASSSLRIAQQ
        I+VL PSS+RPPPLLQSN YVLPPTDLSYHLDV+NPQI S+F VG+PWAH+NPNVQASSSL IAQQ
Subjt:  IHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASSSLRIAQQ

A0A5A7TDW1 Kirola-like7.0e-2569.47Show/hide
Query:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ
        AH V+ L  DLTVPP SS VACSVP+VPIHVL P+S RPP LLQSN Y LPP DLSYH DV+NPQIHS+F+VG+   H NPN+QASS S  I+QQ
Subjt:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ

A0A5D3DEH6 Kirola-like1.2e-3768.66Show/hide
Query:  MEIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILHNFSSPHTTIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS---SNR
        MEIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILHNFSS                       PP +S       H P+  L+     SNR
Subjt:  MEIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILHNFSSPHTTIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPS---SNR

Query:  PPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKV
        PPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKV
Subjt:  PPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKV

A0A5D3DL79 Transposon Tf2-1 polyprotein isoform X17.0e-2569.47Show/hide
Query:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ
        AH V+ L  DLTVPP SS VACSVP+VPIHVL P+S RPP LLQSN Y LPP DLSYH DV+NPQIHS+F+VG+   H NPN+QASS S  I+QQ
Subjt:  AHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLPPTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASS-SLRIAQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATCAAACAACAGAGGACAGCCGCCAGTTTTAGTACTGCTGTTGTTGTCGTCTTCGATGCTTGGATCAACGCTACGATGAAAAAATGGATCTGCCACATTCAGAA
AACACCGAGAAACATAATTCTGCATAATTTCTCATCTCCACACACCACTATCAGAGCTAACGCGCAGGCCCATCTTGTTAAGACGTTGTCAGCCGACCTAACTGTGCCAC
CCACGTCTTCATCTGTGGCTTGTAGTGTCCCCCACGTGCCGATTCATGTGCTATCACCTAGTTCCAACCGGCCACCACCGCTTCTGCAGTCAAATTCGTATGTCCTGCCA
CCCACTGACCTTAGTTATCATCTTGATGTTAAGAACCCTCAAATTCACTCAATGTTTAAAGTTGGTAAACCTTGGGCACATTCCAACCCTAACGTGCAAGCTTCCTCTTC
TTTGAGAATAGCTCAACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATCAAACAACAGAGGACAGCCGCCAGTTTTAGTACTGCTGTTGTTGTCGTCTTCGATGCTTGGATCAACGCTACGATGAAAAAATGGATCTGCCACATTCAGAA
AACACCGAGAAACATAATTCTGCATAATTTCTCATCTCCACACACCACTATCAGAGCTAACGCGCAGGCCCATCTTGTTAAGACGTTGTCAGCCGACCTAACTGTGCCAC
CCACGTCTTCATCTGTGGCTTGTAGTGTCCCCCACGTGCCGATTCATGTGCTATCACCTAGTTCCAACCGGCCACCACCGCTTCTGCAGTCAAATTCGTATGTCCTGCCA
CCCACTGACCTTAGTTATCATCTTGATGTTAAGAACCCTCAAATTCACTCAATGTTTAAAGTTGGTAAACCTTGGGCACATTCCAACCCTAACGTGCAAGCTTCCTCTTC
TTTGAGAATAGCTCAACAGTAA
Protein sequenceShow/hide protein sequence
MEIKQQRTAASFSTAVVVVFDAWINATMKKWICHIQKTPRNIILHNFSSPHTTIRANAQAHLVKTLSADLTVPPTSSSVACSVPHVPIHVLSPSSNRPPPLLQSNSYVLP
PTDLSYHLDVKNPQIHSMFKVGKPWAHSNPNVQASSSLRIAQQ