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IVF0023677 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023677
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:28899967..28900392
RNA-Seq ExpressionIVF0023677
SyntenyIVF0023677
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037345.1 retrotransposon protein [Cucumis melo var. makuwa]5.64e-8795.04Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DFP VYSQG+D+SQDDVRASRPSRA EGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLM EDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

KAA0065692.1 retrotransposon protein [Cucumis melo var. makuwa]1.30e-8694.33Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DFP VYSQG+D+SQDDVRASRPSRASEGRT SSGSKRKRGSQRDFELEAIHLALDQTNEQLR+IAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLM EDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

KAA0067987.1 retrotransposon protein [Cucumis melo var. makuwa]8.08e-91100Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

TYK10915.1 retrotransposon protein [Cucumis melo var. makuwa]1.96e-8695.04Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DFP VYSQG+D+SQDDVRASRPSRASEGRT SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLM EDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

TYK30971.1 retrotransposon protein [Cucumis melo var. makuwa]5.51e-8794.33Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DF SVYSQG+D+SQDDVRASRPSRASEGRTRSSGSKRKRGSQRDF++EAIHLALDQTNEQLRQIAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLM EDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

TrEMBL top hitse value%identityAlignment
A0A5A7T2T9 Retrotransposon protein6.8e-6795.04Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DFP VYSQG+D+SQDDVRASRPSRASEGRT SSGSKRKRGS RDFELEAIHLALDQTNEQLRQIAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

A0A5A7T7A5 Retrotransposon protein8.9e-6795.04Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DFP VYSQG+D+SQDDVRASRPSRA EGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLM EDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

A0A5A7VL88 Retrotransposon protein2.9e-70100Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

A0A5D3CHA0 Retrotransposon protein1.2e-6695.04Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DFP VYSQG+D+SQDDVRASRPSRASEGRT SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLM EDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

A0A5D3DCZ1 Retrotransposon protein1.2e-6695.04Show/hide
Query:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS
        MGDGN+DFP VYSQG+D+SQDDVRASRPSRASEGRT SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWP RNLANDNHVRTEFFRILREMPELTS
Subjt:  MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTS

Query:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER
        LDRALLQRHLLSRMDDLRGFVLM EDEREGFCRVLLRDIER
Subjt:  LDRALLQRHLLSRMDDLRGFVLMLEDEREGFCRVLLRDIER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATGGAAACAAGGACTTCCCGTCCGTGTACAGCCAGGGAATTGATCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAG
ATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAACGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGC
CAACACGCAACCTTGCAAATGACAATCACGTGCGCACGGAATTTTTCCGTATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTT
TTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCTTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCTTACGAGACATTGAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATGGAAACAAGGACTTCCCGTCCGTGTACAGCCAGGGAATTGATCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAG
ATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAACGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGC
CAACACGCAACCTTGCAAATGACAATCACGTGCGCACGGAATTTTTCCGTATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTT
TTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCTTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCTTACGAGACATTGAGAGATAA
Protein sequenceShow/hide protein sequence
MGDGNKDFPSVYSQGIDLSQDDVRASRPSRASEGRTRSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPTRNLANDNHVRTEFFRILREMPELTSLDRALLQRHL
LSRMDDLRGFVLMLEDEREGFCRVLLRDIER