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IVF0023678 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023678
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr04:11315441..11315902
RNA-Seq ExpressionIVF0023678
SyntenyIVF0023678
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035431.1 hypothetical protein E6C27_scaffold285G00510 [Cucumis melo var. makuwa]2.77e-5070.27Show/hide
Query:  MNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTFFGDLAIPIDEFEIPKNKSLIV
        MNM+N+L AKIKVRYNY GFIP+ IRIKDK+GH F+VH++ ICL KWLAERDVKIH SF+RQ AI F+NFNPKA+ F F GDLAIPI EF+IP+N++L+ 
Subjt:  MNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTFFGDLAIPIDEFEIPKNKSLIV

Query:  ELTMEGNPTHA
        ELT E +PT A
Subjt:  ELTMEGNPTHA

KAA0035766.1 hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa]2.13e-5767.11Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF
        +DTFLQIGN+  GLLEV+KATMNM+NL+ AKIKVRYNY GFI ATIRIKDK+ H FVVH++TIC  KWLA+RDVKIH SFKRQ AIEFD FN KAE F F
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF

Query:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTLR
         GDLAI   +F+I +N  L+ ELT E +PT  K+I D DLPKS  K  +
Subjt:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTLR

TYK01568.1 hypothetical protein E5676_scaffold451G001460 [Cucumis melo var. makuwa]7.29e-7477.7Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF
        MDTFLQ GNAC  LLEVDKA MN+ENLL AKI VRYNYC FIPATI+IKDKNGHSF+VH +TIC  KWLAERDVKI+SSFKRQ AIEFDNFN +A+ FTF
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF

Query:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTL
          +LAI  DEFEIPKNKSL+ ELT+EGNPTHAKEINDKDL KS I  +
Subjt:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTL

TYK26098.1 hyoscyamine 6-dioxygenase-like [Cucumis melo var. makuwa]4.42e-5465.96Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSF-VVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNP-KAEHF
        MDTF+QIGNACG L EVDK TM+M NL  AKIKV+YNY GFIP  IRIKDK+ H F   H++TIC  KWLA+RDVKIH  FKRQ AI FD+FNP KAE F
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSF-VVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNP-KAEHF

Query:  TFFGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKD
         F GDLAIP  EFE  KN++L+ ELT E +PT AK+I ++D
Subjt:  TFFGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKD

TYK29852.1 hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa]3.92e-5867.79Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF
        +DTFLQIGN+  GLLEV+KATMNM+NL+ AKIKVRYNY GFI ATIRIKDK+GH FVVH++TIC  KWLAERDVKIH SFKRQ AIEFD FN KAE F F
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF

Query:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTLR
          DLAI   +F+I +N  L+ ELT E +PT  K+I D DLPKS  K  +
Subjt:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTLR

TrEMBL top hitse value%identityAlignment
A0A5A7T0M9 DUF4283 domain-containing protein1.0e-4768.49Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF
        +DTFLQIGN+  GLLEV+KATMNM+NL+ AKIKVRYNY GFI ATIRIKDK+ H FVVH++TIC  KWLA+RDVKIH SFKRQ AIEFD FN KAE F F
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF

Query:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIK
         GDLAI   +F+I +N  L+ ELT E +PT  K+I D DLPKS  K
Subjt:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIK

A0A5D3BRD1 Uncharacterized protein3.3e-5977.7Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF
        MDTFLQ GNAC  LLEVDKA MN+ENLL AKI VRYNYC FIPATI+IKDKNGHSF+VH +TIC  KWLAERDVKI+SSFKRQ AIEFDNFN +A+ FTF
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF

Query:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTL
          +LAI  DEFEIPKNKSL+ ELT+EGNPTHAKEINDKDL KS I  +
Subjt:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTL

A0A5D3DR13 Uncharacterized protein1.4e-3870.27Show/hide
Query:  MNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTFFGDLAIPIDEFEIPKNKSLIV
        MNM+N+L AKIKVRYNY GFIP+ IRIKDK+GH F+VH++ ICL KWLAERDVKIH SF+RQ AI F+NFNPKA+ F F GDLAIPI EF+IP+N++L+ 
Subjt:  MNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTFFGDLAIPIDEFEIPKNKSLIV

Query:  ELTMEGNPTHA
        ELT E +PT A
Subjt:  ELTMEGNPTHA

A0A5D3DRB3 Hyoscyamine 6-dioxygenase-like9.7e-4365.96Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSF-VVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNP-KAEHF
        MDTF+QIGNACG L EVDK TM+M NL  AKIKV+YNY GFIP  IRIKDK+ H F   H++TIC  KWLA+RDVKIH  FKRQ AI FD+FNP KAE F
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSF-VVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNP-KAEHF

Query:  TFFGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKD
         F GDLAIP  EFE  KN++L+ ELT E +PT AK+I ++D
Subjt:  TFFGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKD

A0A5D3E1T4 DUF4283 domain-containing protein2.6e-4869.18Show/hide
Query:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF
        +DTFLQIGN+  GLLEV+KATMNM+NL+ AKIKVRYNY GFI ATIRIKDK+GH FVVH++TIC  KWLAERDVKIH SFKRQ AIEFD FN KAE F F
Subjt:  MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTF

Query:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIK
          DLAI   +F+I +N  L+ ELT E +PT  K+I D DLPKS  K
Subjt:  FGDLAIPIDEFEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACTTTCCTCCAAATCGGAAACGCATGTGGAGGTCTGTTGGAAGTAGACAAAGCTACAATGAATATGGAAAATCTCCTTTATGCCAAAATTAAGGTAAGGTACAA
CTACTGCGGATTCATTCCAGCTACTATTAGAATTAAAGACAAAAATGGCCATTCTTTCGTTGTTCACTCAATTACAATATGCTTGAGCAAGTGGTTAGCTGAACGCGATG
TTAAAATACATAGTTCTTTCAAGAGACAGACAGCCATTGAATTTGATAACTTCAACCCAAAAGCGGAGCACTTCACCTTCTTCGGCGATTTGGCAATTCCGATCGACGAG
TTTGAAATCCCAAAAAACAAATCATTAATAGTAGAATTGACAATGGAAGGAAATCCCACACATGCCAAGGAAATTAATGACAAGGATCTTCCAAAATCGGGTATAAAAAC
TCTAAGAGGTCGAAATTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACACTTTCCTCCAAATCGGAAACGCATGTGGAGGTCTGTTGGAAGTAGACAAAGCTACAATGAATATGGAAAATCTCCTTTATGCCAAAATTAAGGTAAGGTACAA
CTACTGCGGATTCATTCCAGCTACTATTAGAATTAAAGACAAAAATGGCCATTCTTTCGTTGTTCACTCAATTACAATATGCTTGAGCAAGTGGTTAGCTGAACGCGATG
TTAAAATACATAGTTCTTTCAAGAGACAGACAGCCATTGAATTTGATAACTTCAACCCAAAAGCGGAGCACTTCACCTTCTTCGGCGATTTGGCAATTCCGATCGACGAG
TTTGAAATCCCAAAAAACAAATCATTAATAGTAGAATTGACAATGGAAGGAAATCCCACACATGCCAAGGAAATTAATGACAAGGATCTTCCAAAATCGGGTATAAAAAC
TCTAAGAGGTCGAAATTGGTAG
Protein sequenceShow/hide protein sequence
MDTFLQIGNACGGLLEVDKATMNMENLLYAKIKVRYNYCGFIPATIRIKDKNGHSFVVHSITICLSKWLAERDVKIHSSFKRQTAIEFDNFNPKAEHFTFFGDLAIPIDE
FEIPKNKSLIVELTMEGNPTHAKEINDKDLPKSGIKTLRGRNW