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IVF0023681 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023681
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionEMILIN-1
Genome locationchr04:7608174..7608515
RNA-Seq ExpressionIVF0023681
SyntenyIVF0023681
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036849.1 EMILIN-1 [Cucumis melo var. makuwa]2.58e-75100Show/hide
Query:  MEPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLYHHIEDEDDDDDPFDCNTSERSRVCWSTFWRGSEAVTKGVNGLGWIGLRDILNSTHIFGLVG
        MEPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLYHHIEDEDDDDDPFDCNTSERSRVCWSTFWRGSEAVTKGVNGLGWIGLRDILNSTHIFGLVG
Subjt:  MEPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLYHHIEDEDDDDDPFDCNTSERSRVCWSTFWRGSEAVTKGVNGLGWIGLRDILNSTHIFGLVG

Query:  LSGCIIIIIIICF
        LSGCIIIIIIICF
Subjt:  LSGCIIIIIIICF
WP_221753244.1 nitrate- and nitrite sensing domain-containing protein [Streptomyces sp. TRM72054]6.55e-0457.89Show/hide
Query:  EPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLY
        EP L+ LGDG EP L  LGDG +P L  LGD  EPR++
Subjt:  EPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLY
TrEMBL top hitse value%identityAlignment
A0A5A7T646 EMILIN-11.6e-58100Show/hide
Query:  MEPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLYHHIEDEDDDDDPFDCNTSERSRVCWSTFWRGSEAVTKGVNGLGWIGLRDILNSTHIFGLVG
        MEPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLYHHIEDEDDDDDPFDCNTSERSRVCWSTFWRGSEAVTKGVNGLGWIGLRDILNSTHIFGLVG
Subjt:  MEPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLYHHIEDEDDDDDPFDCNTSERSRVCWSTFWRGSEAVTKGVNGLGWIGLRDILNSTHIFGLVG

Query:  LSGCIIIIIIICF
        LSGCIIIIIIICF
Subjt:  LSGCIIIIIIICF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTCGCTTGAGCGAACTTGGAGATGGGATGGAGCCTCGCTTGAGCGAACTTGGAGATGGGATGGAGCCTCGCTTGAACGAACTTGGAGATGGGATGGAGCCTCG
ACTATACCACCACATTGAAGATGAAGATGATGATGATGATCCTTTTGACTGCAACACATCGGAGAGGAGTAGAGTTTGTTGGTCAACATTTTGGAGAGGAAGCGAAGCTG
TAACTAAGGGTGTAAATGGGTTGGGTTGGATTGGGTTGAGAGACATTCTCAACTCAACCCATATTTTCGGGTTGGTCGGGTTGTCGGGTTGTATTATTATTATTATTATT
ATTTGTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTCGCTTGAGCGAACTTGGAGATGGGATGGAGCCTCGCTTGAGCGAACTTGGAGATGGGATGGAGCCTCGCTTGAACGAACTTGGAGATGGGATGGAGCCTCG
ACTATACCACCACATTGAAGATGAAGATGATGATGATGATCCTTTTGACTGCAACACATCGGAGAGGAGTAGAGTTTGTTGGTCAACATTTTGGAGAGGAAGCGAAGCTG
TAACTAAGGGTGTAAATGGGTTGGGTTGGATTGGGTTGAGAGACATTCTCAACTCAACCCATATTTTCGGGTTGGTCGGGTTGTCGGGTTGTATTATTATTATTATTATT
ATTTGTTTCTAA
Protein sequenceShow/hide protein sequence
MEPRLSELGDGMEPRLSELGDGMEPRLNELGDGMEPRLYHHIEDEDDDDDPFDCNTSERSRVCWSTFWRGSEAVTKGVNGLGWIGLRDILNSTHIFGLVGLSGCIIIIII
ICF