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IVF0023700 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023700
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr01:13858521..13858709
RNA-Seq ExpressionIVF0023700
SyntenyIVF0023700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051467.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.53e-1354.84Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MA++  EA M EME K N  MKVV+++DH IT SR+QM+T E  E SQTPIVK  D+   V+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

KAA0054831.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.42e-1256.45Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MAN+ TEA M +ME K N  MKVVK+QDH IT  R+QM+T E  E SQTP+VK  D+   V+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

KAA0056792.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.67e-1254.84Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MA++ TE  MVEME K N  MKVV+++DH IT  R+QM+T E  E SQTP+VKV D+   V+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

KAA0067627.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.47e-1258.06Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MA V  EAIMVEME K N  MKVV++QDH I   +DQMK  E  ELS+TP VK  D+   VL
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

TYK11759.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.62e-1253.23Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MA++  +A MVEME K N  MKVV+++DH IT  R+QM+T E  E SQTP+VK  D+ N V+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

TrEMBL top hitse value%identityAlignment
A0A5A7ULS4 Ty3-gypsy retrotransposon protein3.1e-0854.84Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MA++ TE  MVEME K N  MKVV+++DH IT  R+QM+T E  E SQTP+VKV D+   V+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

A0A5A7UMP5 Ty3-gypsy retrotransposon protein8.3e-0956.45Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MAN+ TEA M +ME K N  MKVVK+QDH IT  R+QM+T E  E SQTP+VK  D+   V+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

A0A5A7V6H5 Ty3-gypsy retrotransposon protein2.4e-0857.89Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDR
        MAN+  EA+M EME K N  MKVV+++DH ITT R+QM+T E  E SQTP+VK  D+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDR

A0A5A7VKD9 Ty3-gypsy retrotransposon protein4.1e-0858.06Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MA V  EAIMVEME K N  MKVV++QDH I   +DQMK  E  ELS+TP VK  D+   VL
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

A0A5D3CND6 Ty3-gypsy retrotransposon protein4.1e-0853.23Show/hide
Query:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL
        MA++  +A MVEME K N  MKVV+++DH IT  R+QM+T E  E SQTP+VK  D+ N V+
Subjt:  MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATGTAGCAACCGAGGCAATAATGGTAGAGATGGAGATGAAGAAAAATCTCTTCATGAAAGTTGTTAAGGATCAAGATCATTCAATCACTACCTCAAGAGATCA
AATGAAGACTCTAGAAATTTTTGAGTTGAGTCAAACTCCCATTGTCAAAGTTGGTGATAGAGAGAATACTGTGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATGTAGCAACCGAGGCAATAATGGTAGAGATGGAGATGAAGAAAAATCTCTTCATGAAAGTTGTTAAGGATCAAGATCATTCAATCACTACCTCAAGAGATCA
AATGAAGACTCTAGAAATTTTTGAGTTGAGTCAAACTCCCATTGTCAAAGTTGGTGATAGAGAGAATACTGTGTTATAG
Protein sequenceShow/hide protein sequence
MANVATEAIMVEMEMKKNLFMKVVKDQDHSITTSRDQMKTLEIFELSQTPIVKVGDRENTVL