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IVF0023703 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023703
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein L5
Genome locationchr12:4486224..4486755
RNA-Seq ExpressionIVF0023703
SyntenyIVF0023703
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAP33159.1 ribosomal protein L5 [Cucumis sativus]9.14e-5560.34Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG + Q +FHYEDI RQ+ LLK N+TNVMEVP  S I+V+PKE YDFR K  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         H M +F FK+IIGIV+SFLNSP EI+KNSIQF METEFFEFF EL DH +IFS TL F+V IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

AEN56134.1 ribosomal protein L5 [Cucumis melo subsp. melo]3.96e-6767.82Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG +QQ +FHYEDISRQDPLLKQNHTNVMEVP  SSI+V+PKE YDFRRK  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         HEMSNFSFK+IIGIVMSFLNSP EI++NS++FSMETEFFEFF EL DH +IFSKTL FNV IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

KAA0034876.1 ribosomal protein L5 [Cucumis melo var. makuwa]1.78e-6667.82Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG +QQ +FHYEDISRQDPLLKQNHTNVMEVP  SSI+V+PKE YDFRRK  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         HEMSNFSFK+IIGIVMSFLNSP EI++NS++FSMETEFFEFF EL DH +IFSKTL FNV IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

YP_004849341.1 ribosomal protein L5 [Cucumis sativus]3.40e-5761.49Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG + Q +FHYEDISRQ+PLLK N+TNVMEVP  S I+V+PKE YDFR K  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         H M +F FK+IIGIV+SFLNSP EI+KNSIQF METEFFEFF EL DH +IFS TL F+V IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

YP_009913650.1 ribosomal protein L5 [Luffa acutangula]2.19e-4356.29Show/hide
Query:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF
        FHYED+SRQDPLLK NH NVMEVP    I+V+PK  YDF  K  K+                  GKSF SN FLESNKDKGY+           H MSNF
Subjt:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF

Query:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
        S +  I  VMS L+SP EI++NSIQFSMETEF EF  EL DH +IF   L FNV IVTSA T+DETL
Subjt:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

TrEMBL top hitse value%identityAlignment
A0A3S9JIG3 Ribosomal protein L53.8e-5267.82Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG +QQ +FHYEDISRQDPLLKQNHTNVMEVP  SSI+V+PKE YDFRRK  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         HEMSNFSFK+IIGIVMSFLNSP EI++NS++FSMETEFFEFF EL DH +IFSKTL FNV IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

A0A5A7SYB1 Ribosomal protein L5 (Mitochondrion)3.8e-5267.82Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG +QQ +FHYEDISRQDPLLKQNHTNVMEVP  SSI+V+PKE YDFRRK  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         HEMSNFSFK+IIGIVMSFLNSP EI++NS++FSMETEFFEFF EL DH +IFSKTL FNV IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

G3EIZ3 Ribosomal protein L51.3e-4461.49Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG + Q +FHYEDISRQ+PLLK N+TNVMEVP  S I+V+PKE YDFR K  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         H M +F FK+IIGIV+SFLNSP EI+KNSIQF METEFFEFF EL DH +IFS TL F+V IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

G3EU44 Ribosomal protein L53.8e-5267.82Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG +QQ +FHYEDISRQDPLLKQNHTNVMEVP  SSI+V+PKE YDFRRK  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         HEMSNFSFK+IIGIVMSFLNSP EI++NS++FSMETEFFEFF EL DH +IFSKTL FNV IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

Q7Y6H0 Ribosomal protein L59.4e-4360.34Show/hide
Query:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------
        MG + Q +FHYEDI RQ+ LLK N+TNVMEVP  S I+V+PKE YDFR K  K+                 GKSF SN FLESNKDKGY+          
Subjt:  MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI-----------------GKSFLSNQFLESNKDKGYIR---------

Query:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
         H M +F FK+IIGIV+SFLNSP EI+KNSIQF METEFFEFF EL DH +IFS TL F+V IVTSAKT+DETL
Subjt:  -HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

SwissProt top hitse value%identityAlignment
P26860 60S ribosomal protein L5, mitochondrial1.4e-1938.29Show/hide
Query:  SNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDF------------------RRKKWKIGKSFLSNQFL---ESNKDKGYIR-------
        +  + +FHY  + R D LLK N+ N+MEVP L  I V+PK   +F                   R +   GKSF  N+F+   ES +D GY+        
Subjt:  SNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDF------------------RRKKWKIGKSFLSNQFL---ESNKDKGYIR-------

Query:  --HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
          H M NF  K++   ++SF + P +IQKNSIQ SM T     F E+ DH +IF     F+V IVTSA T+DET+
Subjt:  --HEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

P42793 60S ribosomal protein L5, mitochondrial1.6e-3151.5Show/hide
Query:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF
        FHYED+ RQD LLK N+ NVMEVP L  I+V+PK  Y+F  K  K+                  GKSF SN FL SNKDKGY+           H MSNF
Subjt:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF

Query:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
          +++   VMS L+ P EI+KNSIQFSMETEF EF  EL DH +IF     FNV I+TSA T+DETL
Subjt:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

P49388 60S ribosomal protein L5, mitochondrial1.2e-2648.5Show/hide
Query:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF
        FHYED+SRQDPLL +    + +      I+V+P   Y+F  K  K+                  GKSF SN FL SNKDKGY+           H MSNF
Subjt:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF

Query:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
        S  V I  VMS L+ P EI+KNSIQFSMETEF EF  +L DH +IF     FNV IVTSA T+DETL
Subjt:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

P51409 60S ribosomal protein L5, mitochondrial4.1e-2750.61Show/hide
Query:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFR--------------RKKWKIGKSFLSNQFLESNKD-KGYIR----------HEMSNFSFK
        FHYED+ RQD LLK N+ NVMEVP L  I V+PK +   +              +++   GKSF SN FL SNKD KGY+           H MS+  F 
Subjt:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFR--------------RKKWKIGKSFLSNQFLESNKD-KGYIR----------HEMSNFSFK

Query:  VIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
        V I  VMS L+SP EI++ SIQFSMETEF EF  EL DH +IF     FNV IVTSA T+DETL
Subjt:  VIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

Q05492 60S ribosomal protein L5, mitochondrial2.1e-3152.66Show/hide
Query:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKES--YDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMS
        FHYED+ RQD LLK N  NVMEVP L  I+++PK S  YDF  K  K+                  GKSF SN FLESNKDKGY+           H MS
Subjt:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKES--YDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMS

Query:  NFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
        NF  +++   VMS L+S  EI++NSIQFSMETEF EF  EL DH +IF    RFNV IVTSA T+DETL
Subjt:  NFSFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

Arabidopsis top hitse value%identityAlignment
AT2G07725.1 Ribosomal L5P family protein2.5e-3554.49Show/hide
Query:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF
        FHYED+SRQDPLLK NH NVMEVP    I+V+PK  Y+F  K  K+                  GKSF SN FL SNKDKGY+           H MSNF
Subjt:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF

Query:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
        S  V I  VMS L+ P EI+KNSIQFSMETEF EF  EL DH +IF     FNV I+TSA T+DETL
Subjt:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL

ATMG00210.1 ribosomal protein L52.5e-3554.49Show/hide
Query:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF
        FHYED+SRQDPLLK NH NVMEVP    I+V+PK  Y+F  K  K+                  GKSF SN FL SNKDKGY+           H MSNF
Subjt:  FHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKI------------------GKSFLSNQFLESNKDKGYIR----------HEMSNF

Query:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL
        S  V I  VMS L+ P EI+KNSIQFSMETEF EF  EL DH +IF     FNV I+TSA T+DETL
Subjt:  SFKVIIGIVMSFLNSPTEIQKNSIQFSMETEFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCAAACCAACAATTCAAGTTTCATTACGAAGATATATCACGTCAGGATCCATTGCTCAAACAGAACCACACTAACGTTATGGAAGTTCCTGAATTGTCTTCAAT
AAAGGTCATGCCAAAGGAATCCTATGATTTTAGAAGAAAAAAATGGAAAATTGGAAAGTCCTTTCTATCCAATCAATTTTTGGAGTCAAATAAAGACAAAGGATATATTA
GGCATGAAATGTCTAATTTTTCTTTCAAAGTCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGACTGAAATACAGAAAAACTCCATTCAATTCTCGATGGAAACG
GAGTTTTTCGAATTCTTCGTAGAACTGATAGATCATTCTAAGATCTTCTCTAAGACTTTAAGGTTCAATGTGATTATTGTCACTTCTGCCAAGACAAAAGATGAGACTTT
ATCATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCAAACCAACAATTCAAGTTTCATTACGAAGATATATCACGTCAGGATCCATTGCTCAAACAGAACCACACTAACGTTATGGAAGTTCCTGAATTGTCTTCAAT
AAAGGTCATGCCAAAGGAATCCTATGATTTTAGAAGAAAAAAATGGAAAATTGGAAAGTCCTTTCTATCCAATCAATTTTTGGAGTCAAATAAAGACAAAGGATATATTA
GGCATGAAATGTCTAATTTTTCTTTCAAAGTCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGACTGAAATACAGAAAAACTCCATTCAATTCTCGATGGAAACG
GAGTTTTTCGAATTCTTCGTAGAACTGATAGATCATTCTAAGATCTTCTCTAAGACTTTAAGGTTCAATGTGATTATTGTCACTTCTGCCAAGACAAAAGATGAGACTTT
ATCATCATAG
Protein sequenceShow/hide protein sequence
MGSNQQFKFHYEDISRQDPLLKQNHTNVMEVPELSSIKVMPKESYDFRRKKWKIGKSFLSNQFLESNKDKGYIRHEMSNFSFKVIIGIVMSFLNSPTEIQKNSIQFSMET
EFFEFFVELIDHSKIFSKTLRFNVIIVTSAKTKDETLSS