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IVF0023707 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023707
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionpathogenesis-related protein PR-1 type-like
Genome locationchr01:1004554..1005041
RNA-Seq ExpressionIVF0023707
SyntenyIVF0023707
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
InterPro domainsIPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031388.1 pathogenesis-related protein PR-1 type-like [Cucumis melo var. makuwa]5.18e-18100Show/hide
Query:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
Subjt:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

KAA0031389.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa]1.27e-1591.11Show/hide
Query:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNANSFLVG
        MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA    VG
Subjt:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNANSFLVG

KGN43828.1 hypothetical protein Csa_017229 [Cucumis sativus]3.73e-3372.73Show/hide
Query:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA-------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        MSKMAL T LS LCIVAL LTPIV+AQNSPQDF DAHNA             NSFLVGCATVKCK+NWS ++SCNYSPS NVVGERPY
Subjt:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA-------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

XP_004137081.1 basic form of pathogenesis-related protein 1 [Cucumis sativus]8.94e-1938.12Show/hide
Query:  MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA----------------------------------------------------------------
        MAL T LS LCIVAL LTPIV+AQNSPQDF DAHNA                                                                
Subjt:  MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA----------------------------------------------------------------

Query:  ------------------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
                                NSFLVGCATVKCK+NWS ++SCNYSPS NVVGERPY
Subjt:  ------------------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

XP_016901700.1 PREDICTED: pathogenesis-related protein PR-1 type-like [Cucumis melo]5.36e-3152.55Show/hide
Query:  MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA----------------------------------------------------------------
        MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA                                                                
Subjt:  MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA----------------------------------------------------------------

Query:  -NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
         NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
Subjt:  -NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

TrEMBL top hitse value%identityAlignment
A0A0A0K2V2 Uncharacterized protein2.9e-2472.73Show/hide
Query:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA-------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        MSKMAL T LS LCIVAL LTPIV+AQNSPQDF DAHNA             NSFLVGCATVKCK+NW S++SCNYSPS NVVGERPY
Subjt:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA-------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

A0A1S4E137 pathogenesis-related protein PR-1 type-like5.5e-2352.55Show/hide
Query:  MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA----------------------------------------------------------------
        MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA                                                                
Subjt:  MALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA----------------------------------------------------------------

Query:  -NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
         NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
Subjt:  -NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

A0A5A7SQ01 Basic form of pathogenesis-related protein 1-like2.4e-1091.11Show/hide
Query:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNANSFLVG
        MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA    VG
Subjt:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNANSFLVG

A0A5D3C673 Pathogenesis-related protein PR-1 type-like8.7e-13100Show/hide
Query:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
Subjt:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

A0A5D3C911 Pathogenesis-related protein 1A-like1.3e-0829.45Show/hide
Query:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA-------------------------------------------------------------
        MSKMAL    S++C++ LTL P++VA N+PQ++VDAHNA                                                             
Subjt:  MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNA-------------------------------------------------------------

Query:  ---------------------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
                                   NSFL+GCA +KCK+NW S++SCNYSP+ NV GE PY
Subjt:  ---------------------------NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

SwissProt top hitse value%identityAlignment
P07053 Pathogenesis-related protein 1B1.1e-0458.33Show/hide
Query:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        NS  VGCA VKC +N   V+SCNY P  NV+G+ PY
Subjt:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

P09042 Pathogenesis-related protein 1C5.5e-0452.78Show/hide
Query:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        NS  VGCA V+C +N   ++SCNY P  NV+G+ PY
Subjt:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

P35792 Pathogenesis-related protein PRB1-29.3e-0450Show/hide
Query:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        +GCA V C +N    I+CNY P  N+VG++PY
Subjt:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY

P35793 Pathogenesis-related protein PRB1-39.3e-0450Show/hide
Query:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        +GCA V C +N    I+CNY P  N+VG++PY
Subjt:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY

Q40374 Pathogenesis-related protein PR-19.3e-0453.12Show/hide
Query:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        VGCA+V C D+  + ++CNY P  N  GERPY
Subjt:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY

Arabidopsis top hitse value%identityAlignment
AT2G14580.1 basic pathogenesis-related protein 13.3e-0447.22Show/hide
Query:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        NS  +GCA V+C +N  ++ISCNY P  N   ++PY
Subjt:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

AT2G14610.1 pathogenesis-related gene 12.5e-0451.43Show/hide
Query:  SFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        S  +GCA V+C +N  ++ISCNY P  N V E+PY
Subjt:  SFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

AT2G19990.1 pathogenesis-related protein-1-like5.6e-0441.67Show/hide
Query:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        +S  +GCA+V+CK++    + C+Y P  N +G+RPY
Subjt:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY

AT4G25790.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein5.6e-0450Show/hide
Query:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        +GCA V C++     I+CNY P  N VGE+PY
Subjt:  VGCATVKCKDNWSSVISCNYSPSRNVVGERPY

AT4G33710.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein8.7e-0558.33Show/hide
Query:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY
        NS  VGCA VKC DN  + ++CNYS   NV G RPY
Subjt:  NSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAAATGGCACTCGTCACCGCTCTCTCCACCCTTTGCATCGTTGCACTAACCCTAACCCCAATCGTCGTTGCTCAAAACAGCCCTCAAGACTTCGTCGATGCACA
CAATGCAAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGGACAATTGGTCTTCAGTGATCTCATGCAACTATAGTCCTTCTAGGAATGTTGTAGGTGAGCGAC
CTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAAATGGCACTCGTCACCGCTCTCTCCACCCTTTGCATCGTTGCACTAACCCTAACCCCAATCGTCGTTGCTCAAAACAGCCCTCAAGACTTCGTCGATGCACA
CAATGCAAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGGACAATTGGTCTTCAGTGATCTCATGCAACTATAGTCCTTCTAGGAATGTTGTAGGTGAGCGAC
CTTATTAA
Protein sequenceShow/hide protein sequence
MSKMALVTALSTLCIVALTLTPIVVAQNSPQDFVDAHNANSFLVGCATVKCKDNWSSVISCNYSPSRNVVGERPY