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IVF0023710 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023710
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related pol polyprotein from transposon tnt 1-94
Genome locationchr07:21965307..21965972
RNA-Seq ExpressionIVF0023710
SyntenyIVF0023710
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]2.40e-6299.12Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
KAA0039507.1 hypothetical protein E6C27_scaffold64G003290 [Cucumis melo var. makuwa]2.01e-5994.59Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEK RPKRQ KPSKKVLENVKEQKN+RGKKNDSPKPTR+SPRI+
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQIS
        DLAPSFDLQIS
Subjt:  DLAPSFDLQIS
KAA0065297.1 hypothetical protein E6C27_scaffold1023G00110 [Cucumis melo var. makuwa]9.71e-6397.35Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPT++SPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
TYK15261.1 hypothetical protein E5676_scaffold892G00380 [Cucumis melo var. makuwa]5.91e-6499.12Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
TYK22453.1 uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa]2.40e-6299.12Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
TrEMBL top hitse value%identityAlignment
A0A5A7TDE0 Uncharacterized protein1.5e-4594.59Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEK RPKRQ KPSKKVLENVKEQKN+RGKKNDSPKPTR+SPRI+
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQIS
        DLAPSFDLQIS
Subjt:  DLAPSFDLQIS
A0A5A7VDY1 Uncharacterized protein4.3e-4897.35Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPT++SPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
A0A5A7VIA9 Uncharacterized protein5.1e-4999.12Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
A0A5D3CTS8 Uncharacterized protein5.1e-4999.12Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
A0A5D3DFX6 Uncharacterized protein5.1e-4999.12Show/hide
Query:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
        MIDADVDKEKEIEDNEET+EDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR
Subjt:  MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATGCTGATGTTGATAAAGAGAAAGAGATTGAAGATAATGAGGAAACCAAGGAAGATGATAATCATCGTGAAAATAAGTCAAAAATGGTGCATGACACATCAAA
CAAAGTGAAGGTTGTTCAAGAAAAGGCAAAAGTGAAAATTATGGAAATAGCGACGAATATTGAAAAAGCTAGGCCGAAGAGACAACCTAAACCATCAAAGAAAGTGTTGG
AGAATGTGAAAGAACAAAAGAATGTAAGAGGCAAGAAGAATGATTCTCCAAAACCAACAAGATATTCTCCTAGAATAAGGGATCTAGCACCTAGTTTTGATTTGCAAATC
TCTCAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATGCTGATGTTGATAAAGAGAAAGAGATTGAAGATAATGAGGAAACCAAGGAAGATGATAATCATCGTGAAAATAAGTCAAAAATGGTGCATGACACATCAAA
CAAAGTGAAGGTTGTTCAAGAAAAGGCAAAAGTGAAAATTATGGAAATAGCGACGAATATTGAAAAAGCTAGGCCGAAGAGACAACCTAAACCATCAAAGAAAGTGTTGG
AGAATGTGAAAGAACAAAAGAATGTAAGAGGCAAGAAGAATGATTCTCCAAAACCAACAAGATATTCTCCTAGAATAAGGGATCTAGCACCTAGTTTTGATTTGCAAATC
TCTCAATTATAA
Protein sequenceShow/hide protein sequence
MIDADVDKEKEIEDNEETKEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRYSPRIRDLAPSFDLQI
SQL