CuGenDBv2

Gene ID	IVF0023724
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	E3 ubiquitin-protein ligase CHFR isoform X3
Genome location	chr08:21512515..21537192
RNA-Seq Expression	IVF0023724
Synteny	IVF0023724
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040909 - E3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc binding

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008442085.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis melo]

1.56e-111

99.35

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

XP_008442086.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis melo]

1.22e-111

99.35

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

XP_016899584.1 PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X3 [Cucumis melo]

3.18e-112

99.35

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

XP_031739668.1 E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis sativus]

1.51e-108

86.71

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Query:  MQVGGNHYYLISLTVPIQVIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQ
        +Q  G ++YL+++    +VIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCLGCDRAFCGAYW+
Subjt:  MQVGGNHYYLISLTVPIQVIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQ

Query:  AQSLQRSDIYATCSPETFKPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        AQSLQRSDIYATCSPETFKPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI R
Subjt:  AQSLQRSDIYATCSPETFKPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

XP_031739669.1 E3 ubiquitin-protein ligase CHFR isoform X3 [Cucumis sativus]

1.56e-106

94.19

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCLGCDRAFCGAYW+AQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYR0 RING-type domain-containing protein

2.8e-92

94.64

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRN+KRP F+LGLEESGGLELPCPQCGTEYAGFRC+PHMVHLQCH CGGMMPSRFDTGIPQHCLGCDRAFCGAYW+AQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGRFFPTLFLIYLFLE
        KPIS RTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRF+NREIGRFFPTLF IYLFLE
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGRFFPTLFLIYLFLE

A0A1S3B4G1 E3 ubiquitin-protein ligase CHFR isoform X1

3.7e-89

99.35

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

A0A1S3B4V7 E3 ubiquitin-protein ligase CHFR isoform X2

3.7e-89

99.35

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

A0A1S4DUC8 E3 ubiquitin-protein ligase CHFR isoform X3

3.7e-89

99.35

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

A0A6J1F3R3 E3 ubiquitin-protein ligase CHFR isoform X2

1.4e-75

85.81

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Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        VIGS KKR +KRP  VLG EESG LELPCPQCGTEYAGFRC+P+ VHLQCHGCGGMMPSRFD GIPQHCLGCDRAFCGAYW+AQ LQRS  YATC+PET 
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        KPIS RTISRIPQLTHENN+HEQDIT RCISQMGKTLQDVISEWIV+FNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G47570.1 RING/U-box superfamily protein

4.3e-45

53.55

Show/hide

Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        +IGS +KR    P      EE   L L CPQC     G+RC  H  HLQCH C GMMP R +  +P HC GCDR FCGAYW ++++ +      C  ETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        +PIS RTI+RIP +THE NRHEQDIT RCI+ M KT+ DV++EW+  FNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

AT1G47570.2 RING/U-box superfamily protein

4.3e-45

53.55

Show/hide

Query:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF
        +IGS +KR    P      EE   L L CPQC     G+RC  H  HLQCH C GMMP R +  +P HC GCDR FCGAYW ++++ +      C  ETF
Subjt:  VIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIYATCSPETF

Query:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR
        +PIS RTI+RIP +THE NRHEQDIT RCI+ M KT+ DV++EW+  FNNREI R
Subjt:  KPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGR

Sequences

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CDS sequence

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ATGCAAGTGGGAGGCAACCATTACTACCTCATATCATTAACCGTCCCTATACAGGTCATTGGGTCTGTGAAAAAGCGAAACGAAAAAAGGCCTCGTTTTGTATTGGGCCT
GGAGGAGAGCGGTGGTTTAGAGCTTCCATGCCCTCAATGTGGTACTGAATATGCTGGATTTCGCTGTAGTCCACACATGGTTCATCTACAATGTCATGGATGTGGAGGAA
TGATGCCTTCTCGATTTGATACTGGGATACCTCAACATTGTTTAGGTTGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGTTTACAAAGAAGTGATATATAT
GCCACTTGCAGTCCCGAAACTTTTAAACCAATTTCCGGACGTACCATCTCAAGAATTCCACAGTTGACACATGAAAATAATCGGCATGAACAGGATATTACGGGGAGGTG
CATTAGTCAGATGGGTAAAACATTGCAAGATGTCATCTCGGAATGGATTGTAAGGTTTAACAACAGAGAAATTGGTAGGTTTTTTCCAACTTTGTTTTTAATTTATTTAT
TTTTGGAATGA

mRNA sequence

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Protein sequence

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MQVGGNHYYLISLTVPIQVIGSVKKRNEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAFCGAYWQAQSLQRSDIY
ATCSPETFKPISGRTISRIPQLTHENNRHEQDITGRCISQMGKTLQDVISEWIVRFNNREIGRFFPTLFLIYLFLE

IVF0023724 (gene) of Melon (IVF77) v1 genome