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IVF0023732 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023732
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr06:18487226..18487432
RNA-Seq ExpressionIVF0023732
SyntenyIVF0023732
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]3.05e-3092.65Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]3.20e-3092.65Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
TYK05459.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo var. makuwa]1.02e-3088.24Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSP+LSPSPAPSTNNAT TVSSSKPPLPDKK+A+ATKK TSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
TYK08901.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.09e-3292.65Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
TYK18867.1 hypothetical protein E5676_scaffold204G00690 [Cucumis melo var. makuwa]1.05e-3191.18Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSP+PAPSTNNATGTVSSS+PPLPDKKRARA+KKTTST W+HFTKLEKN SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
TrEMBL top hitse value%identityAlignment
A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.5e-2491.18Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNN TGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-2492.65Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-2492.65Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-2492.65Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like4.5e-2491.18Show/hide
Query:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
        METSSGQHSETSPSLSPSPAPSTNN TGTVSSSKPPLPDKK+ RATKKTTSTVW+HFTKLE+N SRCT
Subjt:  METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAAGTAGTGGACAACATAGTGAAACTAGCCCAAGTCTTAGTCCTAGTCCTGCCCCTTCTACTAATAACGCAACAGGAACTGTGAGTTCAAGTAAACCACCACT
ACCTGATAAGAAGAGAGCTAGAGCCACTAAGAAAACAACTTCCACTGTATGGAATCATTTCACAAAGTTGGAAAAGAATGGTTCTAGATGCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAAGTAGTGGACAACATAGTGAAACTAGCCCAAGTCTTAGTCCTAGTCCTGCCCCTTCTACTAATAACGCAACAGGAACTGTGAGTTCAAGTAAACCACCACT
ACCTGATAAGAAGAGAGCTAGAGCCACTAAGAAAACAACTTCCACTGTATGGAATCATTTCACAAAGTTGGAAAAGAATGGTTCTAGATGCACATGA
Protein sequenceShow/hide protein sequence
METSSGQHSETSPSLSPSPAPSTNNATGTVSSSKPPLPDKKRARATKKTTSTVWNHFTKLEKNGSRCT