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IVF0023734 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023734
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:5398375..5398647
RNA-Seq ExpressionIVF0023734
SyntenyIVF0023734
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037133.1 retrotransposon protein [Cucumis melo var. makuwa]2.82e-1479.59Show/hide
Query:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRV
        ATI VSSPWVS  EKKGRGDEKNGVKV VF++RRS F RGGILKKE  V
Subjt:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRV

KAA0044825.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]2.98e-1660.26Show/hide
Query:  GEEINRGRRNEKRKIKNSPATIL-VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCVKKEREGF
        G E  R RR E   +  S  T+L +    VS A+KKGRGDEKNGVKV VFV+ RSSF RGG+LKK+  V VKKEREGF
Subjt:  GEEINRGRRNEKRKIKNSPATIL-VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCVKKEREGF

KAA0048509.1 CMP-sialic acid transporter 4 isoform X2 [Cucumis melo var. makuwa]2.07e-2172.06Show/hide
Query:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS
        +G +   Q+ +  GE IN GRRNEKRKIKNSP TI VSSPWVS AEKKGRGDEKNGVKV VFVV  SS
Subjt:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS

KAA0054034.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.58e-1473.47Show/hide
Query:  ILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCV
        + VSSPWVS  +KKGRGDEKNG KV VFV+RRSSF R GILKKE+ VC+
Subjt:  ILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCV

TYK21269.1 thioredoxin H1-like isoform X1 [Cucumis melo var. makuwa]1.50e-2180.33Show/hide
Query:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV
        MGTQETEQKVKY GEEIN GRRNEKRKIKNS ATI VSS WVS ++KK  GDEKNGVK+ V
Subjt:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV

TrEMBL top hitse value%identityAlignment
A0A5A7T2E4 Retrotransposon protein2.6e-1179.59Show/hide
Query:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRV
        ATI VSSPWVS  EKKGRGDEKNGVKV VF++RRS F RGGILKKE  V
Subjt:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRV

A0A5A7TTV0 Transcription factor bHLH36-like1.5e-1160.26Show/hide
Query:  GEEINRGRRNEKRKIKNSPATIL-VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCVKKEREGF
        G E  R RR E   +  S  T+L +    VS A+KKGRGDEKNGVKV VFV+ RSSF RGG+LKK+  V VKKEREGF
Subjt:  GEEINRGRRNEKRKIKNSPATIL-VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCVKKEREGF

A0A5A7U4Z1 CMP-sialic acid transporter 4 isoform X27.8e-1672.06Show/hide
Query:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS
        +G +   Q+ +  GE IN GRRNEKRKIKNSP TI VSSPWVS AEKKGRGDEKNGVKV VFVV  SS
Subjt:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS

A0A5A7UFR0 Ty3-gypsy retrotransposon protein1.7e-1075Show/hide
Query:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCVK
        VSSPWVS  +KKGRGDEKNG KV VFV+RRSSF R GILKKE+ VC++
Subjt:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCVK

A0A5D3DDC9 Thioredoxin H1-like isoform X11.0e-1580.33Show/hide
Query:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV
        MGTQETEQKVKY GEEIN GRRNEKRKIKNS ATI VSS WVS ++KK  GDEKNGVK+ V
Subjt:  MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACACAAGAAACAGAGCAGAAAGTTAAATACCAAGGGGAAGAGATAAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACCGGCAACGATATTGGT
CTCCTCACCGTGGGTCTCCTTTGCCGAGAAGAAAGGACGTGGAGATGAGAAGAATGGGGTTAAGGTTGAGGTTTTCGTCGTGCGTCGTTCGTCGTTCGGGAGGGGAGGGA
TTTTGAAGAAGGAAAGCAGAGTGTGTGTGAAGAAGGAAAGGGAGGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACACAAGAAACAGAGCAGAAAGTTAAATACCAAGGGGAAGAGATAAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACCGGCAACGATATTGGT
CTCCTCACCGTGGGTCTCCTTTGCCGAGAAGAAAGGACGTGGAGATGAGAAGAATGGGGTTAAGGTTGAGGTTTTCGTCGTGCGTCGTTCGTCGTTCGGGAGGGGAGGGA
TTTTGAAGAAGGAAAGCAGAGTGTGTGTGAAGAAGGAAAGGGAGGGATTTTGA
Protein sequenceShow/hide protein sequence
MGTQETEQKVKYQGEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESRVCVKKEREGF