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IVF0023740 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023740
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr02:11384374..11384622
RNA-Seq ExpressionIVF0023740
SyntenyIVF0023740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.01e-4998.78Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRD DEELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.54e-4495.12Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRDTD+ELSHFLGIIGQCLGRF CYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.30e-4796.34Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRDTD+ELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

TYK05803.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.92e-4082.93Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLR KYDD I RMERGAEKL Q+A +ADQFSVQARTLRQGVIPTRDT+ ELSHFLG+I Q L RFGCY+
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

TYK27025.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.86e-4895.12Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQF VQARTLRQGVIPTRDTD+ELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like1.7e-3898.78Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRD DEELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

A0A5A7SUT0 Reverse transcriptase1.4e-3296.05Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLG
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRDTD+ELSHFLGIIGQCLG
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLG

A0A5A7TXA1 Glial fibrillary acidic protein-like2.1e-3695.12Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRDTD+ELSHFLGIIGQCLGRF CYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

A0A5A7VDD9 Glial fibrillary acidic protein-like2.5e-3796.34Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRDTD+ELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

A0A5D3DUN1 Glial fibrillary acidic protein-like1.2e-3695.12Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQF VQARTLRQGVIPTRDTD+ELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAAGACGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGC
GAGTGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCGATGAAGAATTGTCTCATTTTCTAGGAATCATAGGGCAGT
GCCTCGGACGTTTTGGGTGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAAGACGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGC
GAGTGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCGATGAAGAATTGTCTCATTTTCTAGGAATCATAGGGCAGT
GCCTCGGACGTTTTGGGTGCTACCATTAG
Protein sequenceShow/hide protein sequence
MSIDFMMWKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH