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IVF0023760 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023760
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionS-protein homolog
Genome locationchr01:4744719..4745136
RNA-Seq ExpressionIVF0023760
SyntenyIVF0023760
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050598.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]2.00e-7477.7Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL
        MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVK+    +                         FESFWPESWTNTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL

Query:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
        RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
Subjt:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK

KAE8650575.1 hypothetical protein Csa_010962 [Cucumis sativus]3.05e-6971.94Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL
        MM+RNVVVLWLATAALVGAQVPSWSVSI+N LSHLDLNVHC+SKNDDLGNHHLVK     +                         FE FWPESW+NTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL

Query:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
        RDRCGPE TCIWVAKDGGIYLKNNPANRDEF+HKWWIGK
Subjt:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK

XP_004139725.1 S-protein homolog 1-like [Cucumis sativus]6.22e-7073.38Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL
        MM+RN VVLWLATAALVGAQVPSWSVSIVN LSHLDLNVHC+SKNDDLGNHHLVK+    +                         FE+FWPESW+NTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL

Query:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
        RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
Subjt:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK

XP_008462118.1 PREDICTED: pumilio homolog 15-like [Cucumis melo]2.36e-7477.7Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL
        MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVK+    +                         FESFWPESWTNTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL

Query:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
        RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
Subjt:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK

XP_031739191.1 S-protein homolog 1-like [Cucumis sativus]3.60e-6971.94Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL
        MM+RNVVVLWLATAALVGAQVPSWSVSI+N LSHLDLNVHC+SKNDDLGNHHLVK     +                         FE FWPESW+NTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRL------------------------FESFWPESWTNTWL

Query:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
        RDRCGPE TCIWVAKDGGIYLKNNPANRDEF+HKWWIGK
Subjt:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK

TrEMBL top hitse value%identityAlignment
A0A1S3CG44 S-protein homolog5.6e-3556.62Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLV------------------------KQVRCVRLFESFWPESWTNTWL
        MMMRN++VLWLAT A+VGAQ+P WSV +VN LS+L L+VHC+S NDDLG H+LV                        ++      FESFWPES  NTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLV------------------------KQVRCVRLFESFWPESWTNTWL

Query:  RDRCG-PEGTCIWVAKDGGIYLKNNPANRDEFVHKW
        RDRCG  + TCIW+AKD GIYL+NNP N DEFVHKW
Subjt:  RDRCG-PEGTCIWVAKDGGIYLKNNPANRDEFVHKW

A0A1S3CGQ6 S-protein homolog4.4e-5677.7Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVR------------------------LFESFWPESWTNTWL
        MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVK+    +                         FESFWPESWTNTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVR------------------------LFESFWPESWTNTWL

Query:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
        RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
Subjt:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK

A0A5A7U5P7 S-protein homolog4.4e-5677.7Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVR------------------------LFESFWPESWTNTWL
        MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVK+    +                         FESFWPESWTNTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVR------------------------LFESFWPESWTNTWL

Query:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
        RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK
Subjt:  RDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK

A0A5A7U8F6 S-protein homolog1.1e-3557.35Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLV------------------------KQVRCVRLFESFWPESWTNTWL
        MMMRN++VLWLAT A+VGAQ+P WSV +VN LS+L L+VHC+S NDDLG H+LV                        ++V     FESFWPES  NTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLV------------------------KQVRCVRLFESFWPESWTNTWL

Query:  RDRCG-PEGTCIWVAKDGGIYLKNNPANRDEFVHKW
        RDRCG  + TCIW+AKD GIYL+NNP N DEFVHKW
Subjt:  RDRCG-PEGTCIWVAKDGGIYLKNNPANRDEFVHKW

A0A5D3C934 S-protein homolog2.1e-3456.62Show/hide
Query:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLV------------------------KQVRCVRLFESFWPESWTNTWL
        MMMRN++VLWLAT A+VGAQ+P WSV +VN LS+L L+VHC+S NDDLG H+LV                        ++V     FESFWPES  NTWL
Subjt:  MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLV------------------------KQVRCVRLFESFWPESWTNTWL

Query:  RDRCG-PEGTCIWVAKDGGIYLKNNPANRDEFVHKW
        RDR G  + TCIW+AKD GIYL+NNP N DEFVHKW
Subjt:  RDRCG-PEGTCIWVAKDGGIYLKNNPANRDEFVHKW

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 12.5e-0830.77Show/hide
Query:  NVVVLWLATAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEG
        +V+V    T  ++  ++  W V++VN L+  + L +HC+SK DDLG  +L  + R    F         FW               W +  L  RCG + 
Subjt:  NVVVLWLATAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEG

Query:  TCIWVAKDGGIYLKNNPANRDEFVHKWWIG
         CIW AK  G+YL N+ +  D    KW +G
Subjt:  TCIWVAKDGGIYLKNNPANRDEFVHKWWIG

Q2HQ46 S-protein homolog 746.9e-0628.69Show/hide
Query:  TAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEGTCIWVAKD
        T  +V  ++  W V++ N L+  + L +HC+SK +DLG+ +L    R    F         FW               W +  L  RC  +  C+W AK+
Subjt:  TAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEGTCIWVAKD

Query:  GGIYLKNNPANRDEFVHKWWIG
         G+YL N+    D    KW  G
Subjt:  GGIYLKNNPANRDEFVHKWWIG

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 11.8e-0930.77Show/hide
Query:  NVVVLWLATAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEG
        +V+V    T  ++  ++  W V++VN L+  + L +HC+SK DDLG  +L  + R    F         FW               W +  L  RCG + 
Subjt:  NVVVLWLATAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEG

Query:  TCIWVAKDGGIYLKNNPANRDEFVHKWWIG
         CIW AK  G+YL N+ +  D    KW +G
Subjt:  TCIWVAKDGGIYLKNNPANRDEFVHKWWIG

AT4G29035.1 Plant self-incompatibility protein S1 family4.9e-0728.69Show/hide
Query:  TAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEGTCIWVAKD
        T  +V  ++  W V++ N L+  + L +HC+SK +DLG+ +L    R    F         FW               W +  L  RC  +  C+W AK+
Subjt:  TAALVGAQVPSWSVSIVNELSHLD-LNVHCRSKNDDLGNHHLVKQVRCVRLFES-------FW------------PESWTNTWLRDRCGPEGTCIWVAKD

Query:  GGIYLKNNPANRDEFVHKWWIG
         G+YL N+    D    KW  G
Subjt:  GGIYLKNNPANRDEFVHKWWIG

AT5G04347.1 Plant self-incompatibility protein S1 family1.6e-0524.03Show/hide
Query:  MRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHL-VKQVRCVRLFESFWPES--WTNTW-----------------LRDRCGP
        M+N+ +  +  +  +       ++ + NEL++  L V CRSK+D+LG+H L V Q+      ++ W  +  W N W                  +   GP
Subjt:  MRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHL-VKQVRCVRLFESFWPES--WTNTW-----------------LRDRCGP

Query:  EGTCIWVAKDGGIYLKNNPANRDEFVHKW
            +W+A++ GIY   +P    +  + W
Subjt:  EGTCIWVAKDGGIYLKNNPANRDEFVHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGAGAAATGTGGTGGTTTTGTGGCTTGCCACGGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAATGAGCTCAGTCACCTCGATTT
GAATGTGCATTGTCGATCCAAGAACGATGATTTGGGAAATCATCACTTGGTTAAACAAGTCAGATGCGTACGTCTCTTTGAAAGCTTTTGGCCCGAATCATGGACTAACA
CTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAATAATCCTGCTAATCGTGATGAATTTGTTCACAAA
TGGTGGATAGGAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGAGAAATGTGGTGGTTTTGTGGCTTGCCACGGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAATGAGCTCAGTCACCTCGATTT
GAATGTGCATTGTCGATCCAAGAACGATGATTTGGGAAATCATCACTTGGTTAAACAAGTCAGATGCGTACGTCTCTTTGAAAGCTTTTGGCCCGAATCATGGACTAACA
CTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAATAATCCTGCTAATCGTGATGAATTTGTTCACAAA
TGGTGGATAGGAAAGTAA
Protein sequenceShow/hide protein sequence
MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRLFESFWPESWTNTWLRDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHK
WWIGK