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IVF0023827 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023827
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGibberellin-regulated protein 2
Genome locationchr12:23678082..23679350
RNA-Seq ExpressionIVF0023827
SyntenyIVF0023827
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055209.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa]5.70e-59100Show/hide
Query:  MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
Subjt:  MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

KGN64291.1 hypothetical protein Csa_013222 [Cucumis sativus]5.71e-7288.98Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
        MAVRKFLLLLLLGVFVFLCLSQ+SS+GY+++  GMKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
Subjt:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM

Query:  CGTCYTSMTTHGNKTKCP
        CGTCYTSMTTHGN+TKCP
Subjt:  CGTCYTSMTTHGNKTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]9.57e-8093.65Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQ--------ISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPP
        MAVRKFLLLLLLGVFVFLCLSQ        ISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPP
Subjt:  MAVRKFLLLLLLGVFVFLCLSQ--------ISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPP

Query:  GTSGNREMCGTCYTSMTTHGNKTKCP
        GTSGNREMCGTCYTSMTTHGNKTKCP
Subjt:  GTSGNREMCGTCYTSMTTHGNKTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]9.28e-83100Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
        MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
Subjt:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM

Query:  CGTCYTSMTTHGNKTKCP
        CGTCYTSMTTHGNKTKCP
Subjt:  CGTCYTSMTTHGNKTKCP

XP_038895055.1 snakin-2-like [Benincasa hispida]1.63e-6282.2Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
        MAVR FLLLLLLG+FV L LSQ+SSDGY ++  GM EMEYDE +VMRG NRRLMQ I+CG ECKRRCGAHSRPNRCIRACGTCC RC+CVP GTSGNREM
Subjt:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM

Query:  CGTCYTSMTTHGNKTKCP
        CGTCYT+MTTHGNKTKCP
Subjt:  CGTCYTSMTTHGNKTKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LW79 Uncharacterized protein4.2e-5489.83Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
        MAVRKFLLLLLLGVFVFLCLSQ+SS+GY  +E GMKEMEYDE ++MRGANRRLMQYIDCGG+C+RRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
Subjt:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM

Query:  CGTCYTSMTTHGNKTKCP
        CGTCYTSMTTHGN+TKCP
Subjt:  CGTCYTSMTTHGNKTKCP

A0A1S3AVJ9 snakin-2-like isoform X22.5e-62100Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
        MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM
Subjt:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREM

Query:  CGTCYTSMTTHGNKTKCP
        CGTCYTSMTTHGNKTKCP
Subjt:  CGTCYTSMTTHGNKTKCP

A0A1S3AW57 snakin-2-like isoform X13.9e-6093.65Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLS--------QISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPP
        MAVRKFLLLLLLGVFVFLCLS        QISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPP
Subjt:  MAVRKFLLLLLLGVFVFLCLS--------QISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPP

Query:  GTSGNREMCGTCYTSMTTHGNKTKCP
        GTSGNREMCGTCYTSMTTHGNKTKCP
Subjt:  GTSGNREMCGTCYTSMTTHGNKTKCP

A0A1S3U3C0 snakin-2-like2.6e-3565.55Show/hide
Query:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEY-DEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNRE
        MA R F   L+LG+ + +CL ++SSD   ++E   +E+++ +E  VMR  NRRLMQ IDCGG CK RC AHSRPN C RACGTCC RC+CVPPGTSGNRE
Subjt:  MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEY-DEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNRE

Query:  MCGTCYTSMTTHGNKTKCP
        +CGTCYTSMTTHGNKTKCP
Subjt:  MCGTCYTSMTTHGNKTKCP

A0A5A7UP17 Snakin-2-like isoform X15.2e-44100Show/hide
Query:  MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
Subjt:  MKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 116.8e-1762.9Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY S+TTHG + KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

P46687 Gibberellin-regulated protein 36.1e-1862.9Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDCGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY S+TT G + KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

P46688 Gibberellin-regulated protein 21.4e-1762.9Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDCGG CK RC   SR   C+RAC +CC RC CVPPGTSGN  +C  CY S+TTHG + KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

Q93X17 Snakin-21.5e-1970.97Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDCGG C  RC   SRP  C RACGTCC RC CVPPGTSGN E C  CY S+TTHGNK KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

Q9LFR3 Gibberellin-regulated protein 142.8e-1864.52Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDC   C  RCG HSR N C+RAC TCC RC+CVPPGT GN+E CG+CY +M T G K+KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein1.1e-1742.59Show/hide
Query:  VFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQY---IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTT
        +  FL LSQ+ ++           +    D+    A +R   +   I+CG  C RRC   SR   C RACG+CC +C+CVPPGTSGN   C  CY S+ T
Subjt:  VFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQY---IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTT

Query:  HGNKTKCP
        HGNK KCP
Subjt:  HGNKTKCP

AT2G18420.1 Gibberellin-regulated family protein4.8e-1862.9Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY S+TTHG + KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

AT4G09600.1 GAST1 protein homolog 34.4e-1962.9Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDCGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY S+TT G + KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

AT4G09610.1 GAST1 protein homolog 29.7e-1962.9Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDCGG CK RC   SR   C+RAC +CC RC CVPPGTSGN  +C  CY S+TTHG + KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP

AT5G14920.1 Gibberellin-regulated family protein2.0e-1964.52Show/hide
Query:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP
        IDC   C  RCG HSR N C+RAC TCC RC+CVPPGT GN+E CG+CY +M T G K+KCP
Subjt:  IDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCCGTAAGTTCCTCCTCCTCCTTCTTCTTGGGGTCTTCGTCTTCCTCTGCCTTTCACAGATATCTTCCGATGGCTACCAAGATCAGGAAGCTGGGATGAAGGA
GATGGAATACGATGAAGATCAAGTGATGAGAGGGGCAAATAGAAGGCTAATGCAATACATAGATTGTGGAGGGGAATGCAAGCGTCGTTGTGGGGCGCACTCGAGGCCAA
ACCGGTGCATAAGAGCGTGCGGGACATGCTGTAGGCGGTGCAGATGTGTACCGCCAGGTACGTCAGGTAATCGCGAGATGTGTGGCACTTGCTACACGAGCATGACCACT
CATGGGAACAAAACCAAGTGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGGTCGAAACCATGGCAGTCCGTAAGTTCCTCCTCCTCCTTCTTCTTGGGGTCTTCGTCTTCCTCTGCCTTTCACAGATATCTTCCGATGGCTACCAAGATCAGGAA
GCTGGGATGAAGGAGATGGAATACGATGAAGATCAAGTGATGAGAGGGGCAAATAGAAGGCTAATGCAATACATAGATTGTGGAGGGGAATGCAAGCGTCGTTGTGGGGC
GCACTCGAGGCCAAACCGGTGCATAAGAGCGTGCGGGACATGCTGTAGGCGGTGCAGATGTGTACCGCCAGGTACGTCAGGTAATCGCGAGATGTGTGGCACTTGCTACA
CGAGCATGACCACTCATGGGAACAAAACCAAGTGCCCTTAACTCTACCCAACGACTACTATGTCATCTTTTTTTCCCTTGGTTCGGTTATTCAATCTTTTGAGTCTTTTG
TTTCCTTCTTCTTTGATGTATGTTTAGAATTATTAGTTGCAAAAACTTTCCTTTTTGTTTCATTTGTATTTCCATGTTTATGTTTCCATTTACGTGCTTGGTTTTTTAAA
CTACATGATCTTGACATCAAATATTTGGG
Protein sequenceShow/hide protein sequence
MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTT
HGNKTKCP