; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023829 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023829
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr01:30347644..30351203
RNA-Seq ExpressionIVF0023829
SyntenyIVF0023829
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014245.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]2.32e-19786.08Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ+ D +KYL+QS+KYSE WW+GVGNN IAGEDA KT+SAEYLN TV+SG TQ QANDENIGKEVQHLKYIPFS SPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP
        SGGRFLNTKKPNNV+SNT+REE INSGANHSTKPV E GSKYMV  E GIK+TL+E+ +E MTQN+QIT AFFNGK N HG+STY SQL DVEGGHLD P
Subjt:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

XP_004135933.1 nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus]8.53e-22396.54Show/hide
Query:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVAD AKYLLQS+K+SEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
        GSGGRFLNTKKPNNVMSNTNREEDI+S ANHSTKPVSE  SKYMVT+EKGIKNTLDEQSRE MTQNMQITHAFFNGKSNVHGLSTY+SQLGDVEGGHLD 
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

XP_008461297.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo]1.05e-232100Show/hide
Query:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
        GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]4.01e-19886.08Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ+ D +KYL+QS+KYSE WWHGVGNNTIAGEDA KT+SA+YLN TV+SG TQ QANDENIGKEVQHLKYIPFSTSPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP
        SGGRFLNTKKPNNV+SNT+REE INSG NHSTKPV+E GSKYM   E GIK+TL+E+ +E MTQN+QIT AFFNGK N HG+STY SQL DVEGGHLD P
Subjt:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

XP_038899773.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]1.04e-20290.19Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQVAD AKYLLQS+KYSEPWWHGVGNNTI GEDAAKTSSAEYLNVTV SGATQ QANDENIGKEVQHLKYIPFSTSPPVGEHLD NSQMEL
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QMLTSYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP
        SGGRFLNTKKPNNV+SNTNREEDINS ANH TKPVS    KY V  E  IK+TL+E  RELM  NMQITHAFFNGKSNVHGLSTYNSQL DVEGGHLD P
Subjt:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit1.6e-17296.54Show/hide
Query:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVAD AKYLLQS+K+SEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
        GSGGRFLNTKKPNNVMSNTNREEDI+S ANHSTKPVSE  SKYMVT+EKGIKNTLDEQSRE MTQNMQITHAFFNGKSNVHGLSTY+SQLGDVEGGHLD 
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

A0A1S3CED9 Nuclear transcription factor Y subunit4.6e-180100Show/hide
Query:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
        GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

A0A5D3CGW1 Nuclear transcription factor Y subunit4.6e-180100Show/hide
Query:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
        MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME
Subjt:  MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQME

Query:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
Subjt:  LVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
        GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDH

Query:  PHESMQVNGAPQRAIPIK
        PHESMQVNGAPQRAIPIK
Subjt:  PHESMQVNGAPQRAIPIK

A0A6J1GNB7 Nuclear transcription factor Y subunit3.1e-15285.44Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ+ D +KYL+QS+KYS  WW+GVGNNTIAGEDA KT+SA+YLN TV+SG TQ Q NDENIGKEVQHLKYIPFS SPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP
        SGGRFLNTKKPNNV+SNT+REE INSGANHSTKPVSE GSKYM   E GIK+TL+E+ +E MTQN+QIT AFFNGK N HG+STY SQL DVEGGHLD P
Subjt:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

A0A6J1JW53 Nuclear transcription factor Y subunit4.5e-15184.81Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL
        MPS+PENVDQQ  D +KYL+QS+KYSE WWHGVGNNTIAGE+A KT+S +YLN TV+SG TQ QANDENIGKEVQHLKYIPFSTSPPVGE LDLNSQMEL
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP
        SGGRFLNTKKPNNV+SNT+RE+ IN GANH TKPV+E GSKYMV  E GIK+TL+E+ +E MTQN+QIT AFFNGK N HG+STY SQL DVEG HLD P
Subjt:  SGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-75.7e-2650.36Show/hide
Query:  HSIVLTSYPFSDAQYCQMLTSYGPQ---ATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR
        +S+    YP+ D  Y + + +  PQ       ++ G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR R
Subjt:  HSIVLTSYPFSDAQYCQMLTSYGPQ---ATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRAR

Query:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVS
        G GGRFLN KK +    +++ EE  N  A  S    S
Subjt:  GSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVS

Q8VY64 Nuclear transcription factor Y subunit A-41.3e-2544Show/hide
Query:  NDENIGKEVQHLKYIPFSTSPPVGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY--------GLHHARMPLPLEMEEEPVYVNA
        N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  +   +  QA LP  Y        G+    +PL  +  EEPV+VNA
Subjt:  NDENIGKEVQHLKYIPFSTSPPVGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY--------GLHHARMPLPLEMEEEPVYVNA

Query:  KQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHS
        KQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE+  S  N S
Subjt:  KQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHS

Q945M9 Nuclear transcription factor Y subunit A-91.1e-3240.56Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQ
        M S+ ++   +V       + SS  S   WH      N  +  +A   SS        ++G+  P   D  + KE Q       +TSP   G++ D N +
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQ

Query:  M------------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR
                     +LVGH++   +S P+ D  Y  ++ +YG  P   +P   G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSR
Subjt:  M------------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR

Query:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHS
        KPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N     S
Subjt:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHS

Q9LXV5 Nuclear transcription factor Y subunit A-19.3e-2937.45Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE
        M S+P   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       ++S  V  
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE

Query:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE
        H                  L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAE
Subjt:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE

Query:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS
        LE+KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S     E  S
Subjt:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS

Q9M9X4 Nuclear transcription factor Y subunit A-21.9e-2635.82Show/hide
Query:  WWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKY------IPFSTSPPVGEHLDLNSQMELVGHS--IVLTSYPFSDAQYCQM
        WW   G+  +A E  A  S + +  V V S     Q  D+       HL +       P     P G    + S    +G S   + T YP+ + QY  +
Subjt:  WWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKY------IPFSTSPPVGEHLDLNSQMELVGHS--IVLTSYPFSDAQYCQM

Query:  LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMS
        +++YG Q+            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+RR RGSGGRFLNTK  N   S
Subjt:  LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMS

Query:  NTN-REEDINSGANHSTKPVSEVGSKYMVTH-EKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGL
         TN ++ D +       KP         V H E G  N     S  L     ++T   +   S VH L
Subjt:  NTN-REEDINSGANHSTKPVSEVGSKYMVTH-EKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGL

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A97.6e-3440.56Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQ
        M S+ ++   +V       + SS  S   WH      N  +  +A   SS        ++G+  P   D  + KE Q       +TSP   G++ D N +
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWWH--GVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSP-PVGEHLDLNSQ

Query:  M------------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR
                     +LVGH++   +S P+ D  Y  ++ +YG  P   +P   G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSR
Subjt:  M------------ELVGHSI-VLTSYPFSDAQYCQMLTSYG--PQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSR

Query:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHS
        KPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N     S
Subjt:  KPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHS

AT5G12840.1 nuclear factor Y, subunit A16.6e-3037.45Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE
        M S+P   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       ++S  V  
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE

Query:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE
        H                  L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAE
Subjt:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE

Query:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS
        LE+KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S     E  S
Subjt:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS

AT5G12840.2 nuclear factor Y, subunit A15.1e-3037.36Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-
        M S+P   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G      K    +TS     H 
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-

Query:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE
                         L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE
Subjt:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE

Query:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS
        +KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S     E  S
Subjt:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS

AT5G12840.3 nuclear factor Y, subunit A16.6e-3037.45Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE
        M S+P   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G  K+ Q       ++S  V  
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIG--KEVQHLKYIPFSTSPPVGE

Query:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE
        H                  L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAE
Subjt:  H----------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE

Query:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS
        LE+KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S     E  S
Subjt:  LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS

AT5G12840.4 nuclear factor Y, subunit A15.1e-3037.36Show/hide
Query:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-
        M S+P   +++  +    + Q   Y+EPWW     GV          + +SS +  N +    V S +     N EN G      K    +TS     H 
Subjt:  MPSEPENVDQQVADRAKYLLQSSKYSEPWW----HGVGNNTIAGEDAAKTSSAEYLNVT----VASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEH-

Query:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE
                         L    ELVGH I     P+ D  Y  ++ +YG Q    R Y G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE
Subjt:  ---------------LDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQATLPRIY-GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELE

Query:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS
        +KVI+ RKPYLHESRH HAMRRAR SGGRF    +         R+ +  S  N S     E  S
Subjt:  KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCATCGGAACCAGAAAATGTAGACCAACAAGTAGCTGATAGGGCGAAGTATTTGCTACAATCGTCTAAATACTCTGAGCCTTGGTGGCATGGAGTTGGGAACAA
CACCATTGCAGGTGAAGATGCTGCCAAAACATCTTCTGCAGAATACCTGAATGTTACTGTTGCCAGTGGAGCAACGCAGCCACAAGCAAATGATGAAAATATTGGGAAAG
AAGTCCAGCATCTCAAGTATATTCCGTTTTCTACATCCCCACCGGTGGGTGAACACCTTGACCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGACATCA
TATCCTTTTTCAGATGCACAATATTGTCAAATGCTGACTTCTTATGGACCACAAGCAACGTTACCTCGTATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGA
AATGGAAGAAGAGCCTGTTTATGTAAACGCAAAGCAGTATCATGGCATCTTGAGGAGACGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAA
AGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATGTCCAATACAAAC
AGGGAGGAAGACATCAATTCTGGTGCAAACCATTCAACTAAACCGGTTAGCGAGGTGGGATCAAAGTACATGGTAACCCATGAAAAAGGAATCAAGAATACACTCGATGA
GCAGAGCAGAGAGTTGATGACACAAAATATGCAGATAACACACGCTTTCTTCAACGGAAAATCTAATGTCCATGGTTTATCCACATACAATTCACAACTTGGTGATGTCG
AGGGAGGACATCTCGATCATCCACATGAAAGTATGCAAGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAAATGA
mRNA sequenceShow/hide mRNA sequence
TTTCCACTTAATTTTTCGTCTTCTCCATTTTTAATTTACATCTCTCTGTCATCTTCCACTGGCACTGCAGAGAGAAAGAGAAAGGGAGAGAGAGAGAGTAATGGAACTGA
GCTAGAAGTCCAAAGCGACCTTCAAGTTAAACCTCTCTAGGGTTCGATCGTCGCCTTAATAATCACACAACACTTGTTTTGAATGATGCCATCGGAACCAGAAAATGTAG
ACCAACAAGTAGCTGATAGGGCGAAGTATTTGCTACAATCGTCTAAATACTCTGAGCCTTGGTGGCATGGAGTTGGGAACAACACCATTGCAGGTGAAGATGCTGCCAAA
ACATCTTCTGCAGAATACCTGAATGTTACTGTTGCCAGTGGAGCAACGCAGCCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATCTCAAGTATATTCCGTT
TTCTACATCCCCACCGGTGGGTGAACACCTTGACCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGTC
AAATGCTGACTTCTTATGGACCACAAGCAACGTTACCTCGTATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCTGTTTATGTAAAC
GCAAAGCAGTATCATGGCATCTTGAGGAGACGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCT
CCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATGTCCAATACAAACAGGGAGGAAGACATCAATTCTGGTGCAA
ACCATTCAACTAAACCGGTTAGCGAGGTGGGATCAAAGTACATGGTAACCCATGAAAAAGGAATCAAGAATACACTCGATGAGCAGAGCAGAGAGTTGATGACACAAAAT
ATGCAGATAACACACGCTTTCTTCAACGGAAAATCTAATGTCCATGGTTTATCCACATACAATTCACAACTTGGTGATGTCGAGGGAGGACATCTCGATCATCCACATGA
AAGTATGCAAGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAAATGAAAGTTTCTTGATGGGGAATGGGGGCTTCTTCTCCAACACCGTTTAACCAGTTTCTAGAGCA
AAAAACTTGAATGCACTCAGTAATGTATTGAGTGTTGATTCTTGTGAGAAGGCTCTTTTAGTGGTTGGAAGCTGATGGATTTGCCCTCTTTCTGCTTGGAAGAAAACTGC
CTTTTTGGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTCGTACTCTGAGGTGAGATTGGAAGAAGATGAAGAAATGCAGTGCACCAAAAAATATGGTACATTCA
CTGCCTATTTCTTTCCTCTTCAATTTACCTCTTTTATTACTTATGTACTTCTTATCATGAATGTCTGTCCCATAAAAAAAAAAATTATGGTCGAAGACTTTTGTAGGCTA
ATTTAGGTGCAATTGGGTGTTGTATCTATTCAACTTTGTGTGCACGTGTCCCGTTGATATGTATTTTCAGGTTTGGTGGACTTCAAGACATTAAATGTGGAATCTCTCTT
TCACCTTTCCCGACTCTCTCTGTTACACACTGGGAGAGTAGAATTTAAAACTAAATCACCTTTTTTTTAGATAATATTATGAATTTAATTTATGTATTTTGAGGTTTTTG
TTTTACTTTTGATTGATGAAATTTGTGGAACTTCAAA
Protein sequenceShow/hide protein sequence
MMPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGATQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTS
YPFSDAQYCQMLTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTN
REEDINSGANHSTKPVSEVGSKYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHPHESMQVNGAPQRAIPIK