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IVF0023835 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023835
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA-dependent RNA polymerase, mitoviral
Genome locationchr03:20188587..20188887
RNA-Seq ExpressionIVF0023835
SyntenyIVF0023835
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11283.1 RNA-dependent RNA polymerase, mitoviral [Cucumis melo var. makuwa]1.24e-1582Show/hide
Query:  EDLQCVPPLSYTAIHIFKKEDVHLACKPQNLRILKSSKELKRRLEVKVRK
        EDLQCVPP SYTAIHIFK+EDVHLACKP+N RI K SKELKRRLEV+  K
Subjt:  EDLQCVPPLSYTAIHIFKKEDVHLACKPQNLRILKSSKELKRRLEVKVRK
TrEMBL top hitse value%identityAlignment
A0A5D3CHB7 RNA-dependent RNA polymerase, mitoviral2.3e-1278.85Show/hide
Query:  EDLQCVPPLSYTAIHIFKKEDVHLACKPQNLRILKSSKELKRRLEVKVRKKM
        EDLQCVPP SYTAIHIFK+EDVHLACKP+N RI K SKELKRRLEV+  K +
Subjt:  EDLQCVPPLSYTAIHIFKKEDVHLACKPQNLRILKSSKELKRRLEVKVRKKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCTATTATCCTCTCACCAGTTTCTGAATCCCCCGTCATCATAATAACATTCTCCAACTCGCGACCTAACCTTAATAAGCCCTTACTTGATCAAAAGTGCATTGA
AGATCTACAGTGCGTTCCTCCCCTTTCGTACACTGCTATACATATTTTCAAGAAGGAAGACGTGCATCTCGCTTGTAAACCCCAAAACCTAAGAATCCTTAAGTCATCTA
AGGAACTAAAGAGGAGATTAGAGGTTAAGGTCAGGAAAAAGATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCTATTATCCTCTCACCAGTTTCTGAATCCCCCGTCATCATAATAACATTCTCCAACTCGCGACCTAACCTTAATAAGCCCTTACTTGATCAAAAGTGCATTGA
AGATCTACAGTGCGTTCCTCCCCTTTCGTACACTGCTATACATATTTTCAAGAAGGAAGACGTGCATCTCGCTTGTAAACCCCAAAACCTAAGAATCCTTAAGTCATCTA
AGGAACTAAAGAGGAGATTAGAGGTTAAGGTCAGGAAAAAGATGGTTTAA
Protein sequenceShow/hide protein sequence
MLPIILSPVSESPVIIITFSNSRPNLNKPLLDQKCIEDLQCVPPLSYTAIHIFKKEDVHLACKPQNLRILKSSKELKRRLEVKVRKKMV