; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023854 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023854
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionExosome complex component RRP4-like protein
Genome locationchr02:22993471..22997966
RNA-Seq ExpressionIVF0023854
SyntenyIVF0023854
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0000178 - exosome (RNase complex) (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036093 - NAC domain superfamily
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057747.1 NAC domain-containing protein 83-like [Cucumis melo var. makuwa]6.94e-16699.59Show/hide
Query:  MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIV
        MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEA EYNNNNNGEGGIIGWSKSGYWKARGREKEIV
Subjt:  MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIV

Query:  SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI
        SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI
Subjt:  SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI

Query:  TTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
        TTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
Subjt:  TTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL

TYJ98430.1 exosome complex component RRP4-like protein [Cucumis melo var. makuwa]5.23e-29684.17Show/hide
Query:  IFLNHTQ--QTRLKNA-----------NYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVA
        IFL   +  QTRLKNA           NYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVA
Subjt:  IFLNHTQ--QTRLKNA-----------NYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVA

Query:  PKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYG
        PKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYG
Subjt:  PKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYG

Query:  IDLILGCNGFIWIGKKLWQPNARKSTYSIRDTAEYMQNCKCYSSVVYLSISLNINVHEMLGSEFFVLVAEKEEIGMMRRLPPGFRFEPTEEELVFEYLKC
        IDLILGCNGFIWIGK +          S +DT    Q  K          +    +HE + +              +R L         EEELVFEYLKC
Subjt:  IDLILGCNGFIWIGKKLWQPNARKSTYSIRDTAEYMQNCKCYSSVVYLSISLNINVHEMLGSEFFVLVAEKEEIGMMRRLPPGFRFEPTEEELVFEYLKC

Query:  KVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRK
        KVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRK
Subjt:  KVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRK

Query:  MKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTS
        MKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTS
Subjt:  MKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTS

Query:  ATFTDFTSTTTATTTFHL
        ATFTDFTSTTTATTTFHL
Subjt:  ATFTDFTSTTTATTTFHL

XP_004138030.1 NAC domain-containing protein 83 isoform X2 [Cucumis sativus]2.10e-15093.42Show/hide
Query:  MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGG-IIGWSKSGYWKARGREKE
        MMR LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVW+LDPWDIPAAGGGDEEKYLFSK EAEE+NNNNNGEGG IIGWSKSGYWKARGREKE
Subjt:  MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGG-IIGWSKSGYWKARGREKE

Query:  IVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVN
        IVS+ENGVALMGMK+TLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLF HI+HPHRHRRRL  SISSTKD NGD +DEHDEHVN
Subjt:  IVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVN

Query:  HITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFH
        HITTSTAFSDDEHDSVSSTASSSSTSATFTDFTST T TTTFH
Subjt:  HITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFH

XP_008464389.1 PREDICTED: NAC domain-containing protein 83-like [Cucumis melo]1.08e-167100Show/hide
Query:  MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEI
        MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEI
Subjt:  MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEI

Query:  VSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNH
        VSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNH
Subjt:  VSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNH

Query:  ITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
        ITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
Subjt:  ITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL

XP_008464390.1 PREDICTED: exosome complex component RRP4 homolog [Cucumis melo]3.84e-15075.63Show/hide
Query:  MRGLQIFLNHTQQTRLKNA-----------NYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQIFLNHTQQTRLKNA           NYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
Subjt:  MRGLQIFLNHTQQTRLKNA-----------NYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGK---------------KLWQPNAR-------KSTYSIRDTAEYMQN-CKCYSSV------------------VYLSISLNINV
        QYGIDLILGCNGFIWIGK               K+ Q  ++       +    +    E  QN C+  +++                  V LSISLNINV
Subjt:  QYGIDLILGCNGFIWIGK---------------KLWQPNAR-------KSTYSIRDTAEYMQN-CKCYSSV------------------VYLSISLNINV

Query:  HEMLGSEFFVLVAEKE
        HEMLGSEFFVLVAEKE
Subjt:  HEMLGSEFFVLVAEKE

TrEMBL top hitse value%identityAlignment
A0A0A0LR52 NAC domain-containing protein3.3e-19688.67Show/hide
Query:  MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGK-
        MLSSMNLPDG QRRRTAVDELN+                  HD LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIG  
Subjt:  MLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGK-

Query:  KLWQPNARKSTYSIRDTAEYMQNCKCYSSVVYLSISLNINVHEMLGSEFFVLVAEKE---EIGMMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASII
         LWQPNARKSTYSIRDTAEYMQNCKCYSSVV+LSISLNI+VHEMLGSEFFVL+AEKE   EIGMMR LPPGFRFEPTEEELVFEYLKCKVFSSALPASII
Subjt:  KLWQPNARKSTYSIRDTAEYMQNCKCYSSVVYLSISLNINVHEMLGSEFFVLVAEKE---EIGMMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASII

Query:  PEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGE-GGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQY
        PEINGVW+LDPWDIPAAGGGDEEKYLFS KEAEE+NNNNNGE GGIIGWSKSGYWKARGREKEIVS+ENGVALMGMK+TLDFYTNNIRKMKKTGWVMHQY
Subjt:  PEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGE-GGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQY

Query:  RLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTT
        RLIIPHSHSSTNKWVLCHILSPTNKLF HI+HPHRHRRRL  SISSTKD NGD +DEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTST T
Subjt:  RLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTT

Query:  ATTTFH
         TTTFH
Subjt:  ATTTFH

A0A1S3CLC6 exosome complex component RRP4 homolog1.0e-12075.63Show/hide
Query:  MRGLQIFLNHTQQTRLKN-----------ANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MRGLQIFLNHTQQTRLKN           ANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
Subjt:  MRGLQIFLNHTQQTRLKN-----------ANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGK---------------KLWQPNAR-------KSTYSIRDTAEYMQN-CKCYSSV------------------VYLSISLNINV
        QYGIDLILGCNGFIWIGK               K+ Q  ++       +    +    E  QN C+  +++                  V LSISLNINV
Subjt:  QYGIDLILGCNGFIWIGK---------------KLWQPNAR-------KSTYSIRDTAEYMQN-CKCYSSV------------------VYLSISLNINV

Query:  HEMLGSEFFVLVAEKE
        HEMLGSEFFVLVAEKE
Subjt:  HEMLGSEFFVLVAEKE

A0A1S3CLH3 NAC domain-containing protein 83-like1.4e-133100Show/hide
Query:  MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEI
        MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEI
Subjt:  MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEI

Query:  VSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNH
        VSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNH
Subjt:  VSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNH

Query:  ITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
        ITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
Subjt:  ITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL

A0A5A7USS6 NAC domain-containing protein 83-like3.4e-13299.59Show/hide
Query:  MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIV
        MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEA EYNNNNNGEGGIIGWSKSGYWKARGREKEIV
Subjt:  MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIV

Query:  SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI
        SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI
Subjt:  SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI

Query:  TTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
        TTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL
Subjt:  TTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL

A0A5D3BF59 Exosome complex component RRP4-like protein1.2e-23584.9Show/hide
Query:  QQTRLKN-----------ANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDI
        +QTRLKN           ANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDI
Subjt:  QQTRLKN-----------ANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDI

Query:  HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
        HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
Subjt:  HYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGKKLWQPNARKSTYSIRDTAEYMQNCKCYSSVVYLSISLNINVHEMLGSEFFVLVAEKEEIGMMRRLPPGFRFEPTEEELVFEYLKCKVFSSALP
        GFIWIGK +          S +DT    Q  K          +    +HE + +              +R L         EEELVFEYLKCKVFSSALP
Subjt:  GFIWIGKKLWQPNARKSTYSIRDTAEYMQNCKCYSSVVYLSISLNINVHEMLGSEFFVLVAEKEEIGMMRRLPPGFRFEPTEEELVFEYLKCKVFSSALP

Query:  ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVM
        ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVM
Subjt:  ASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVM

Query:  HQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTS
        HQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTS
Subjt:  HQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTS

Query:  TTTATTTFHL
        TTTATTTFHL
Subjt:  TTTATTTFHL

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp47.4e-4450.89Show/hide
Query:  LKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G +  ++ G V+RVNKLI V+ LR++Y PEIGD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGK
        ++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ K
Subjt:  VICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGK

Q13868 Exosome complex component RRP41.3e-4352.75Show/hide
Query:  VAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRT
        V  GDT+  + + G ++GHGT     +++ ++ G VERVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +   D+VL+LSSMNLP G  RRR+
Subjt:  VAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRT

Query:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI
        A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG NGFIWI
Subjt:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI

Q2KID0 Exosome complex component RRP47.4e-4452.2Show/hide
Query:  VAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRT
        V  GDT+  + + G ++GHGT     +++ ++ G VERVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +   D+VL+LSSMNLP G  RRR+
Subjt:  VAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRT

Query:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI
        A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG NGFIW+
Subjt:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI

Q8VBV3 Exosome complex component RRP45.7e-4452.75Show/hide
Query:  VAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRT
        V  GDT+  + + G ++GHGT     +++ ++ G VERVNKLI V++L+ RY  E+GDIVVGR+TEV  KRW+++ +   D+VL+LSSMNLP G  RRR+
Subjt:  VAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRT

Query:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI
        A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +ILG NGFIWI
Subjt:  AVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWI

Q9ZVT7 Exosome complex component RRP4 homolog1.7e-8554.19Show/hide
Query:  MRGLQIFLNHTQQTRLK-----------NANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MR LQ+ L+ TQ+ R +           +AN DASV V D++P +++D  LKGHGT +++GE++ T+CGVVERV+KL+YVR+LRARYKPE+GDIVVGRV 
Subjt:  MRGLQIFLNHTQQTRLK-----------NANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR++++++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGK--KLWQPNA--------------------------RKSTYSIRDTAEYMQN------CKCYSSVVYLSISLNINVHEMLGS
        E  GIDLI+GCNGFIW+G+  ++  P A                          R++   I +    + N       +     V LS S NI++H+MLGS
Subjt:  EQYGIDLILGCNGFIWIGK--KLWQPNA--------------------------RKSTYSIRDTAEYMQN------CKCYSSVVYLSISLNINVHEMLGS

Query:  EFFVLVAEKE
        EF V+VAE E
Subjt:  EFFVLVAEKE

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 41.2e-8654.19Show/hide
Query:  MRGLQIFLNHTQQTRLK-----------NANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT
        MR LQ+ L+ TQ+ R +           +AN DASV V D++P +++D  LKGHGT +++GE++ T+CGVVERV+KL+YVR+LRARYKPE+GDIVVGRV 
Subjt:  MRGLQIFLNHTQQTRLK-----------NANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVT

Query:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR++++++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLDIHYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGK--KLWQPNA--------------------------RKSTYSIRDTAEYMQN------CKCYSSVVYLSISLNINVHEMLGS
        E  GIDLI+GCNGFIW+G+  ++  P A                          R++   I +    + N       +     V LS S NI++H+MLGS
Subjt:  EQYGIDLILGCNGFIWIGK--KLWQPNA--------------------------RKSTYSIRDTAEYMQN------CKCYSSVVYLSISLNINVHEMLGS

Query:  EFFVLVAEKE
        EF V+VAE E
Subjt:  EFFVLVAEKE

AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein2.3e-2437.43Show/hide
Query:  RRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP-AAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIV
        R LPPGFRF PT+EEL+  YL  K+F   L    I E++ +   +PW++P  A  G+ E Y +S ++ +               + +GYWKA G++KE+ 
Subjt:  RRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP-AAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIV

Query:  SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNK--WVLCHILSPTNK------LFDHIIHPHRH
        S   G  L+GMK TL FY     +  KT WVMH+YRL   HSH  T K  WV+C + + T        + + I + H H
Subjt:  SSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNK--WVLCHILSPTNK------LFDHIIHPHRH

AT2G33480.1 NAC domain containing protein 418.4e-2743.87Show/hide
Query:  RLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSS
        RLPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P  G  + E Y FS +EA+  N N +        + SGYWKA G +K+I   
Subjt:  RLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSS

Query:  ENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHS---STNKWVLCHI
        +    ++GMK TL FY        +T WV+H+YRL+     S       WVLC +
Subjt:  ENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHS---STNKWVLCHI

AT2G33480.2 NAC domain containing protein 411.7e-2745.1Show/hide
Query:  RLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSS
        RLPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P  G  + E Y FS +EA+  N N +        + SGYWKA G +K+I   
Subjt:  RLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSS

Query:  ENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTN-KWVLCHI
        +    ++GMK TL FY        +T WV+H+YRL+     S  N  WVLC +
Subjt:  ENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTN-KWVLCHI

AT5G13180.1 NAC domain containing protein 834.5e-2837.39Show/hide
Query:  RLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSS
        RLPPGFRF PT+EELV +YLK KV SS LPASIIPE + V   DPWD+P  G  ++E+Y FS +EA+  N N +        + SGYWKA G +K +V+S
Subjt:  RLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSS

Query:  ENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLII--PHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI
          G  ++G+K TL FY        +T W+MH+YRL    P S   T  WVLC I                        +        DD D    ++ H 
Subjt:  ENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLII--PHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHI

Query:  TTSTAFSDDEHDSVSSTASSSSTSATFTDF
          +   S D+ + +++  +   T   F DF
Subjt:  TTSTAFSDDEHDSVSSTASSSSTSATFTDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACTCGCCTTAAGAATGCTAATTATGATGCTTCAGTTGCAGTTGGTGATACTGTTCCTTTCAGTTACGAGGA
TGGCGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTACCACTATTTGTGGAGTAGTTGAGCGAGTCAATAAGCTTATCTATGTACGTTCCCTACGTG
CCAGATATAAACCAGAGATTGGTGATATCGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTACAGCCAAGATGCTGTTTTGATGCTT
TCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGTATTTTTGAAGAAAATGATGTTATTTGTGCAGAAGTACGTGG
TTTTCAGCATGATGGACTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAGTTTCACCATATCTAGTAAAGAGACGCAAACAAC
ACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGGTTTATCTGGATCGGGAAGAAACTTTGGCAACCAAATGCACGAAAGAGTACATACTCC
ATTAGAGACACGGCAGAATATATGCAGAACTGCAAATGCTATTCGAGTGTTGTCTATCTTAGTATTTCTCTGAACATCAATGTACATGAAATGCTCGGTTCGGAGTTCTT
TGTCCTTGTGGCAGAAAAAGAGGAAATAGGAATGATGAGAAGATTGCCACCTGGGTTTCGGTTTGAGCCAACAGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGG
TCTTTTCCTCGGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAATTTGGATCCTTGGGATATTCCTGCTGCAGGTGGTGGGGACGAAGAGAAATACTTA
TTCAGCAAGAAGGAGGCAGAGGAATATAACAATAACAATAATGGAGAAGGAGGAATAATTGGATGGAGTAAGAGTGGATACTGGAAGGCAAGAGGAAGGGAGAAGGAAAT
AGTAAGCAGTGAGAATGGAGTGGCATTAATGGGTATGAAGAGCACTCTGGATTTCTACACCAACAACATCAGGAAGATGAAAAAGACAGGTTGGGTGATGCATCAGTATC
GTCTCATAATACCACATTCTCACTCTTCGACTAACAAATGGGTTCTTTGCCACATCCTTTCTCCTACTAATAAATTATTCGATCATATTATTCACCCCCACCGCCACCGC
CGCCGCCTCCGTTATTCTATTTCTTCTACAAAGGATGAGAATGGGGATGATCAGGATGAGCATGATGAGCATGTAAATCACATCACTACTTCCACCGCCTTCTCCGACGA
CGAACATGATTCTGTTTCCTCCACCGCCTCATCCTCTTCCACTTCCGCCACCTTCACCGATTTCACATCTACAACTACTGCTACTACTACATTCCACTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTCTACAGATTTTCTTGAATCATACCCAACAGACTCGCCTTAAGAATGCTAATTATGATGCTTCAGTTGCAGTTGGTGATACTGTTCCTTTCAGTTACGAGGA
TGGCGTTCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTAGTTACCACTATTTGTGGAGTAGTTGAGCGAGTCAATAAGCTTATCTATGTACGTTCCCTACGTG
CCAGATATAAACCAGAGATTGGTGATATCGTGGTGGGACGTGTTACAGAGGTTGCTCCAAAACGTTGGAGATTGGATATACATTACAGCCAAGATGCTGTTTTGATGCTT
TCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACATGCGGAGTATTTTTGAAGAAAATGATGTTATTTGTGCAGAAGTACGTGG
TTTTCAGCATGATGGACTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAACTTCTAACAGTTTCACCATATCTAGTAAAGAGACGCAAACAAC
ACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATACTCGGATGCAATGGGTTTATCTGGATCGGGAAGAAACTTTGGCAACCAAATGCACGAAAGAGTACATACTCC
ATTAGAGACACGGCAGAATATATGCAGAACTGCAAATGCTATTCGAGTGTTGTCTATCTTAGTATTTCTCTGAACATCAATGTACATGAAATGCTCGGTTCGGAGTTCTT
TGTCCTTGTGGCAGAAAAAGAGGAAATAGGAATGATGAGAAGATTGCCACCTGGGTTTCGGTTTGAGCCAACAGAAGAAGAGCTTGTGTTTGAGTATCTAAAATGCAAGG
TCTTTTCCTCGGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAATTTGGATCCTTGGGATATTCCTGCTGCAGGTGGTGGGGACGAAGAGAAATACTTA
TTCAGCAAGAAGGAGGCAGAGGAATATAACAATAACAATAATGGAGAAGGAGGAATAATTGGATGGAGTAAGAGTGGATACTGGAAGGCAAGAGGAAGGGAGAAGGAAAT
AGTAAGCAGTGAGAATGGAGTGGCATTAATGGGTATGAAGAGCACTCTGGATTTCTACACCAACAACATCAGGAAGATGAAAAAGACAGGTTGGGTGATGCATCAGTATC
GTCTCATAATACCACATTCTCACTCTTCGACTAACAAATGGGTTCTTTGCCACATCCTTTCTCCTACTAATAAATTATTCGATCATATTATTCACCCCCACCGCCACCGC
CGCCGCCTCCGTTATTCTATTTCTTCTACAAAGGATGAGAATGGGGATGATCAGGATGAGCATGATGAGCATGTAAATCACATCACTACTTCCACCGCCTTCTCCGACGA
CGAACATGATTCTGTTTCCTCCACCGCCTCATCCTCTTCCACTTCCGCCACCTTCACCGATTTCACATCTACAACTACTGCTACTACTACATTCCACTTATAATTAATTA
TTCATTATTGTTCCCATATTTCGTCTCTTCTTATAATTATATCATATGCATGCTCAGATATATATATATATATCTATATATATATATATATATATCCTTTCCTTTTTCC
Protein sequenceShow/hide protein sequence
MRGLQIFLNHTQQTRLKNANYDASVAVGDTVPFSYEDGVLKGHGTLDLNGEVVTTICGVVERVNKLIYVRSLRARYKPEIGDIVVGRVTEVAPKRWRLDIHYSQDAVLML
SSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGKKLWQPNARKSTYS
IRDTAEYMQNCKCYSSVVYLSISLNINVHEMLGSEFFVLVAEKEEIGMMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGGDEEKYL
FSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDFYTNNIRKMKKTGWVMHQYRLIIPHSHSSTNKWVLCHILSPTNKLFDHIIHPHRHR
RRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSATFTDFTSTTTATTTFHL