CuGenDBv2

Gene ID	IVF0023882
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RNA-directed DNA methylation 4 isoform X2
Genome location	chr03:16348505..16348878
RNA-Seq Expression	IVF0023882
Synteny	IVF0023882
Gene Ontology terms	GO:0006306 - DNA methylation (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009791 - post-embryonic development (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	IPR013883 - Transcription factor Iwr1 domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039163.1 RNA-directed DNA methylation 4 isoform X2 [Cucumis melo var. makuwa]

2.00e-37

100

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLR
        MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLR
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLR

XP_004139832.1 RNA-directed DNA methylation 4 [Cucumis sativus]

4.25e-24

82.54

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS
        +EIAEDDAS+PFPL QVD+LDHD PSDSDYETDDSNAENNPCFDYPDEEELES SSN+ +  S
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS

XP_008447116.1 PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Cucumis melo]

1.15e-23

80.95

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS
        +EI EDDAS+PFPL QVD+LDHD PSDSDYETDDSNAENNPCFDYPDEEELES+SSN+ +  S
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS

XP_008447118.1 PREDICTED: RNA-directed DNA methylation 4-like isoform X2 [Cucumis melo]

1.13e-23

80.95

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS
        +EI EDDAS+PFPL QVD+LDHD PSDSDYETDDSNAENNPCFDYPDEEELES+SSN+ +  S
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS

XP_008463057.1 PREDICTED: RNA-directed DNA methylation 4 isoform X2 [Cucumis melo]

2.54e-38

100

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLRK
        MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLRK
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5Q3 Uncharacterized protein

4.3e-19

82.54

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS
        +EIAEDDAS+PFPL QVD+LDHD PSDSDYETDDSNAENNPCFDYPDEEELES SSN+ +  S
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS

A0A1S3CIA5 RNA-directed DNA methylation 4 isoform X2

6.6e-28

100

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLRK
        MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLRK
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLRK

A0A1S4DWJ0 RNA-directed DNA methylation 4-like isoform X1

9.5e-19

80.95

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS
        +EI EDDAS+PFPL QVD+LDHD PSDSDYETDDSNAENNPCFDYPDEEELES+SSN+ +  S
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS

A0A5A7T861 RNA-directed DNA methylation 4 isoform X2

2.5e-27

100

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLR
        MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLR
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLR

A0A5D3BU38 RNA-directed DNA methylation 4-like isoform X1

9.5e-19

80.95

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS
        +EI EDDAS+PFPL QVD+LDHD PSDSDYETDDSNAENNPCFDYPDEEELES+SSN+ +  S
Subjt:  MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSS

SwissProt top hits

e value

%identity

Alignment

Q8GYP3 RNA-directed DNA methylation 4

4.9e-04

43.33

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDH--DRPSDSDYETDDSNAENNPCFDYPDEEELESESSNE
        M+I+ED +   FPL  V++ +   D   +SDY+++DSNAE++P  DYP+EEE E E  ++
Subjt:  MEIAEDDASYPFPLKQVDELDH--DRPSDSDYETDDSNAENNPCFDYPDEEELESESSNE

Arabidopsis top hits

e value

%identity

Alignment

AT2G30280.1 RNA-directed DNA methylation 4

3.5e-05

43.33

Show/hide

Query:  MEIAEDDASYPFPLKQVDELDH--DRPSDSDYETDDSNAENNPCFDYPDEEELESESSNE
        M+I+ED +   FPL  V++ +   D   +SDY+++DSNAE++P  DYP+EEE E E  ++
Subjt:  MEIAEDDASYPFPLKQVDELDH--DRPSDSDYETDDSNAENNPCFDYPDEEELESESSNE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGATTGCTGAAGACGATGCCTCTTATCCATTTCCTTTGAAACAAGTTGATGAATTGGATCATGATAGGCCTAGTGACTCCGATTATGAAACTGATGATTCAAATGC
TGAAAACAATCCGTGCTTCGATTACCCGGATGAGGAAGAGTTGGAGAGTGAATCTTCAAATGAGATGATGAGAAGCAGTCCACTCAGAAAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAENNPCFDYPDEEELESESSNEMMRSSPLRK

IVF0023882 (gene) of Melon (IVF77) v1 genome