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IVF0023885 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023885
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnucleotide binding
Genome locationchr09:21845910..21846277
RNA-Seq ExpressionIVF0023885
SyntenyIVF0023885
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647863.1 hypothetical protein Csa_000530 [Cucumis sativus]4.88e-2982.19Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTG-FRFTATGADNVVFNCFSA
        MDVFIP+DYVIRRRIEKKLAAQAP KTR P P DQRPR +   DKEKE P KTG FRFTATGADNVVFNCFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTG-FRFTATGADNVVFNCFSA

KAE8722511.1 Nuclear transcription factor Y subunit C-9 [Hibiscus syriacus]3.79e-0645.33Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGK-TGFRFTATG--ADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK A + PDK         R  +   K  E + P +  G  F  +G  ++ VVF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGK-TGFRFTATG--ADNVVFNCFSA

KAG6606110.1 hypothetical protein SDJN03_03427, partial [Cucurbita argyrosperma subsp. sororia]1.00e-0553.57Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFR
        MDVFIPEDYV RRRIEK+ AA    K R+P P+  R  R + + ++    GKTGFR
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFR

OMO79504.1 hypothetical protein CCACVL1_13647 [Corchorus capsularis]1.84e-0745.68Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFRFTATG---------ADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK AA   +  ++       P      +KEK+T   + FRF +T          A+NVVF+CFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFRFTATG---------ADNVVFNCFSA

PSS09800.1 Centrosome and spindle pole associated protein [Actinidia chinensis var. chinensis]7.09e-0539.24Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFR------FTATG-ADNVVFNCFSA
        MDVFIPE+YV RRR+EK+   +A  K  +PR  D   RR   ++K  + P    +       +T TG  +N+V++C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFR------FTATG-ADNVVFNCFSA

TrEMBL top hitse value%identityAlignment
A0A0A0KKA7 Uncharacterized protein2.2e-2182.19Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTG-FRFTATGADNVVFNCFSA
        MDVFIP+DYVIRRRIEKKLAAQAP KTR P P DQRPR   + DKEKE P KTG FRFTATGADNVVFNCFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTG-FRFTATGADNVVFNCFSA

A0A1R3IAB5 Uncharacterized protein2.4e-0445.68Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFRFTATG---------ADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK AA   +  +      + P      +KEK+T   + FRF +T          A+NVVF+CFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFRFTATG---------ADNVVFNCFSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12805.1 nucleotide binding2.4e-0437.84Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFRFTATGADN---VVFNCFS
        MDVFI E+Y+ RRR+EKK A  A    R      + P + +   +  E+P    FR T  G  +    VF+CFS
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFRFTATGADN---VVFNCFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCTTTATCCCCGAGGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGACAAGACGAGGCAGCCACGCCCCGTCGATCAACGGCC
GAGGAGGAATTCCGACAAGGACAAGGAAAAAGAAACTCCCGGAAAAACCGGATTCCGGTTCACCGCGACCGGCGCCGACAATGTGGTTTTCAATTGCTTCTCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
CTTAATCACATTTTCCTTTCAATCCCTTCAAATAATGGACGTCTTTATCCCCGAGGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGACA
AGACGAGGCAGCCACGCCCCGTCGATCAACGGCCGAGGAGGAATTCCGACAAGGACAAGGAAAAAGAAACTCCCGGAAAAACCGGATTCCGGTTCACCGCGACCGGCGCC
GACAATGTGGTTTTCAATTGCTTCTCTGCTTGAGAGTTTATAGGGTAAATTAATTTTTGTTAGTTCCTATTATTACTAACAAAAGTGGACTTAGAAATGGTTAATATATT
GTTATACAAATGTACTAATTAAATTAGTTGAGTTCCCA
Protein sequenceShow/hide protein sequence
MDVFIPEDYVIRRRIEKKLAAQAPDKTRQPRPVDQRPRRNSDKDKEKETPGKTGFRFTATGADNVVFNCFSA