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IVF0023921 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023921
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCold-regulated protein
Genome locationchr06:6682015..6682461
RNA-Seq ExpressionIVF0023921
SyntenyIVF0023921
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457074.1 PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]6.03e-5198.7Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHH GRRIMAHPATVVYPSVSNAIPI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
XP_022143411.1 uncharacterized protein LOC111013291 [Momordica charantia]4.79e-4892.21Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH  GRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]1.67e-4889.61Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHH GRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]1.18e-4890.91Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVPIC+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHH GRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
XP_031737948.1 uncharacterized protein LOC116402578 [Cucumis sativus]4.97e-5094.81Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        M VG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHH GRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
TrEMBL top hitse value%identityAlignment
A0A0A0LA45 Uncharacterized protein2.0e-3694.81Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        M VG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHH GRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
A0A1S3C5C8 uncharacterized protein LOC1034968424.0e-3798.7Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHH GRRIMAHPATVVYPSVSNAIPI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
A0A218XJX3 Uncharacterized protein2.3e-3287.01Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MA+GVGVPIC+ECGT SNPCRCKVVGPTLGFLAF  AAVVEWP+GALV+CFRH  GRRIMAHPATVVYPSV+NAIPI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
A0A6J1CQ64 uncharacterized protein LOC1110132916.4e-3592.21Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH  GRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
A0A6J1FA13 uncharacterized protein LOC1114421902.9e-3589.61Show/hide
Query:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        MAVG+GVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHH GRRIMAHP TVVYPSVSNA+PI
Subjt:  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein4.8e-2770.42Show/hide
Query:  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI
        +PIC++CGT  NPCRCKVVGPTLG +AF  A +VEWPVGALV+ F+H  GRRIM HPAT VYP VS +IPI
Subjt:  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCGGAGTCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGGTTTTTGGCTTTCGCTGTGGC
GGCGGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTTTGCTTCCGCCACCACAATGGCCGCCGTATCATGGCGCATCCGGCTACCGTCGTATACCCGTCGGTGTCTAATG
CGATTCCGATTTGA
mRNA sequenceShow/hide mRNA sequence
CCGTTATACGCTCCGTTGTGCTCCGGTAACTTAATCCCGGCGAATGGCTGTCGGAGTCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCA
AGGTGGTGGGGCCGACCCTGGGGTTTTTGGCTTTCGCTGTGGCGGCGGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTTTGCTTCCGCCACCACAATGGCCGCCGTATC
ATGGCGCATCCGGCTACCGTCGTATACCCGTCGGTGTCTAATGCGATTCCGATTTGAGAGAATACGCAACTAATGCTGTTCCTTGACATGTTTTTCTTTTCCCAAAGTCC
AATGTATATTAATAATGCATCTGATCAATTTAAGAGTAAAATTAATAGGCCAAATATATACCCTATGTCTCTTCTTATATTATATATATGTGTGTGTACCTATATGTGTG
TAGCCAA
Protein sequenceShow/hide protein sequence
MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHNGRRIMAHPATVVYPSVSNAIPI