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IVF0023923 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023923
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr09:17733739..17734056
RNA-Seq ExpressionIVF0023923
SyntenyIVF0023923
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048463.1 uncharacterized protein E6C27_scaffold61G00640 [Cucumis melo var. makuwa]5.53e-4580.21Show/hide
Query:  DDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLSDDAKL
        D+F ATIE I+AEMA+MK+ VNL MR  GNQT N V SVSSK KIP+PKAFNGNRDVKELE FIFDM+QYFKASGT+S+ETKVTLASMHLSDDAKL
Subjt:  DDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLSDDAKL

KAA0067610.1 uncharacterized protein E6C27_scaffold485G00780 [Cucumis melo var. makuwa]4.52e-68100Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
        MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS

Query:  DDAKL
        DDAKL
Subjt:  DDAKL

KAA0067615.1 uncharacterized protein E6C27_scaffold485G00840 [Cucumis melo var. makuwa]3.61e-3587.32Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEI
        MLK F+DLSDDF AT +KIE EMAKMKMQVNLTMR  GNQT NPVCSVSSKLKIPEPKAFNGNRDVKELEI
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEI

TYK03491.1 uncharacterized protein E5676_scaffold121G001100 [Cucumis melo var. makuwa]3.68e-4573.33Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
        MLK F+DLSDDF ATIE I+ +M ++K+QV LTMRA GNQT N VC+VSS+LKIPEPKAF+ NRD KELE FI D++QYFKASG +SEETKVTLA M+LS
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS

Query:  DDAKL
        DDAKL
Subjt:  DDAKL

WP_217833205.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.66e-4674.29Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
        MLK FNDL+DDF AT+E I AEM +MK QVNLTMRA GNQT N   ++ ++ KIPEPKAF+GNRD K+LE FIFDM QYFKASGT SEE KVTLASMHLS
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS

Query:  DDAKL
        DDAKL
Subjt:  DDAKL

TrEMBL top hitse value%identityAlignment
A0A5A7VKA0 Uncharacterized protein1.5e-50100Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
        MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS

Query:  DDAKL
        DDAKL
Subjt:  DDAKL

A0A5D3BUS6 Uncharacterized protein2.8e-3373.33Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
        MLK F+DLSDDF ATIE I+ +M ++K+QV LTMRA GNQT N VC+VSS+LKIPEPKAF+ NRD KELE FI D++QYFKASG +SEETKVTLA M+LS
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS

Query:  DDAKL
        DDAKL
Subjt:  DDAKL

A0A5D3DYE0 Uncharacterized protein8.1e-3380.21Show/hide
Query:  DDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLSDDAKL
        D+F ATIE I+AEMA+MK+ VNL MR  GNQT N V SVSSK KIP+PKAFNGNRDVKELE FIFDM+QYFKASGT+S+ETKVTLASMHLSDDAKL
Subjt:  DDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLSDDAKL

A0A6J1D906 Reverse transcriptase2.7e-2860Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
        M++ FN++++DF  TI+ + AEM ++  +VNLTMRA GNQ  N      +KLK+PEPK FNGNRD K+LE F+FD++QYFKA+GT SEE KVTLA+MHL+
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS

Query:  DDAKL
        DDAKL
Subjt:  DDAKL

A0A6J1DK29 uncharacterized protein LOC1110218291.3e-2557.14Show/hide
Query:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS
        M++ FN++++DF  TI+ + AEM ++  +VNLTMRA GNQ  N      +KLK+PEPK FNGNR  K+LE F FD++QYFK +GT SE  KVTLA+MHL+
Subjt:  MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLS

Query:  DDAKL
        DDAKL
Subjt:  DDAKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAAGTTTTTTAACGATCTATCAGACGACTTTGGAGCAACGATTGAGAAAATCGAGGCCGAGATGGCCAAGATGAAAATGCAAGTAAATTTGACCATGCGAGCAGC
GGGGAACCAGACCCTGAATCCAGTATGTAGTGTTTCGAGTAAGCTCAAGATCCCAGAACCCAAAGCCTTCAATGGGAACCGCGATGTTAAAGAACTTGAAATTTTCATCT
TCGATATGCAGCAATACTTTAAGGCTAGTGGAACCGATTCTGAAGAAACCAAGGTGACATTAGCCTCTATGCATCTGTCTGATGATGCAAAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAAGTTTTTTAACGATCTATCAGACGACTTTGGAGCAACGATTGAGAAAATCGAGGCCGAGATGGCCAAGATGAAAATGCAAGTAAATTTGACCATGCGAGCAGC
GGGGAACCAGACCCTGAATCCAGTATGTAGTGTTTCGAGTAAGCTCAAGATCCCAGAACCCAAAGCCTTCAATGGGAACCGCGATGTTAAAGAACTTGAAATTTTCATCT
TCGATATGCAGCAATACTTTAAGGCTAGTGGAACCGATTCTGAAGAAACCAAGGTGACATTAGCCTCTATGCATCTGTCTGATGATGCAAAACTCTGA
Protein sequenceShow/hide protein sequence
MLKFFNDLSDDFGATIEKIEAEMAKMKMQVNLTMRAAGNQTLNPVCSVSSKLKIPEPKAFNGNRDVKELEIFIFDMQQYFKASGTDSEETKVTLASMHLSDDAKL