; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0023931 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023931
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationchr08:18907929..18910433
RNA-Seq ExpressionIVF0023931
SyntenyIVF0023931
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649745.1 hypothetical protein Csa_012025 [Cucumis sativus]3.73e-9091.19Show/hide
Query:  LLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADP
        +L NCNILLVT P+VLVQMPCGKKK M  SQIR FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADP
Subjt:  LLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADP

Query:  KIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        KIMADSEYPAWLW+LL+KHPPLSELRRKNAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  KIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK

XP_004144674.3 39S ribosomal protein L54, mitochondrial [Cucumis sativus]2.42e-7693.89Show/hide
Query:  LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRK
        +SQIR FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRK
Subjt:  LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRK

Query:  NAESLPYADLRRFVKLDTRARIKENNSIKAK
        NAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  NAESLPYADLRRFVKLDTRARIKENNSIKAK

XP_008442187.1 PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]7.24e-83100Show/hide
Query:  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR
        MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR
Subjt:  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR

Query:  RKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        RKNAESLPYADLRRFVKLDTRARIKENNSIKAK
Subjt:  RKNAESLPYADLRRFVKLDTRARIKENNSIKAK

XP_016899597.1 PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]1.16e-103100Show/hide
Query:  MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD
        MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD
Subjt:  MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD

Query:  PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
Subjt:  PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK

XP_038883606.1 39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]2.65e-7388.32Show/hide
Query:  KKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPL
        K KKM +SQIR FRR+I V+SKDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKAS LSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHLLDKHPPL
Subjt:  KKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPL

Query:  SELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        SELRRKN E+LPY DL+RFVKLDTRA+IKENNS KAK
Subjt:  SELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK

TrEMBL top hitse value%identityAlignment
A0A0A0KYS4 Uncharacterized protein1.2e-5993.13Show/hide
Query:  LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRK
        +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRK
Subjt:  LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRK

Query:  NAESLPYADLRRFVKLDTRARIKENNSIKAK
        NAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  NAESLPYADLRRFVKLDTRARIKENNSIKAK

A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X29.4e-65100Show/hide
Query:  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR
        MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR
Subjt:  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR

Query:  RKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        RKNAESLPYADLRRFVKLDTRARIKENNSIKAK
Subjt:  RKNAESLPYADLRRFVKLDTRARIKENNSIKAK

A0A1S4DUD4 39S ribosomal protein L54, mitochondrial isoform X19.4e-81100Show/hide
Query:  MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD
        MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD
Subjt:  MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD

Query:  PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
Subjt:  PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK

A0A5D3CXE8 39S ribosomal protein L549.4e-81100Show/hide
Query:  MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD
        MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD
Subjt:  MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGAD

Query:  PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
Subjt:  PKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like3.3e-4980.45Show/hide
Query:  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR
        M +SQIR FRR+++ ++KDLI+LT+VR+FAAGGK KKGSKGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L+DK P LSELR
Subjt:  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR

Query:  RKNAESLPYADLRRFVKLDTRARIKENNSIKAK
        RK+A++LPY DL+RFVKLDTRARIKENNS KAK
Subjt:  RKNAESLPYADLRRFVKLDTRARIKENNSIKAK

SwissProt top hitse value%identityAlignment
Q9CPW3 39S ribosomal protein L54, mitochondrial3.6e-0537.5Show/hide
Query:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSI
        KG KGG AA+A K   + +   + TT  +G NI KEG D  + ADSEYP WL+  ++  PP  +L     ES  Y  L R   +    R+ +N  +
Subjt:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSI

Q9Y7U8 54S ribosomal protein L37, mitochondrial8.9e-0427.42Show/hide
Query:  PMVLVQMPCGKKKKMGLSQIRFFRRNIIV-----SSKDLIQLTSVRSFAAGGKSKKGSKGGAAAD-APKASILSKEVKSTTVVGANILKEGADPKIMADS
        P +    P  +    G+SQ   +   +++     SS  L++ + V S  +  K +  S   ++A      +  S  +  T + G  I   G DP    D 
Subjt:  PMVLVQMPCGKKKKMGLSQIRFFRRNIIV-----SSKDLIQLTSVRSFAAGGKSKKGSKGGAAAD-APKASILSKEVKSTTVVGANILKEGADPKIMADS

Query:  EYPAWLWHLLDKHPPLSELRRKNA
        EYP WLW LLD+  P S+  R +A
Subjt:  EYPAWLWHLLDKHPPLSELRRKNA

Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L371.4e-4171.19Show/hide
Query:  SSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRF
        SSKD+++ T     AA  K+KKG KGG A+DAPK S L+KE+KSTTVVGAN LK+G+DPKI+ DS+YP WLWHLLDK P LSELRRKN E+LPY DL+RF
Subjt:  SSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRF

Query:  VKLDTRARIKENNSIKAK
        VKLDTR +IKENNSIKAK
Subjt:  VKLDTRARIKENNSIKAK

AT5G14290.1 Mitochondrial ribosomal protein L374.5e-3560.61Show/hide
Query:  LSQIRFFRRNIIVSSKDLIQLTSVRSFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRR
        ++ IR F  + I  SKD+++    R+FA A GK+KK  +G    DAPKAS LSKE+KS+ VV AN LK+G DPKI+ +S++P +LWHLLDK P LSELRR
Subjt:  LSQIRFFRRNIIVSSKDLIQLTSVRSFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRR

Query:  KNAESLPYADLRRFVKLDTRARIKENNSIKAK
        KN E+L + DL+RFVKLDTRARIKEN+SIKAK
Subjt:  KNAESLPYADLRRFVKLDTRARIKENNSIKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTGGACAACTGTAATATATTGTTGGTCACATTTCCAATGGTGCTTGTTCAAATGCCCTGTGGGAAAAAGAAAAAAATGGGTTTGAGCCAAATTAGATTTTTTAG
AAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTACGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATG
CTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCT
GCTTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATAC
TCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
GTTGCCCTTTCCTTAAGCCCACTACCAAGTACCAGCCACCTTCATCTCCATTCCCCATCCCTCCATCTCTTTCATCTCGCATTTCTCCTCTCGCATATCCTCTTTTGTTC
CCTCTTCTTCCATCTCTTCGATCTCCACCGCCACGCCGGCCAATATCAATCATCTCCTCTTCTTCCATCTCTCAGGACACTTCCCAATATCAATCCTTCCCAACATCAAT
CCCAAATCAAACTAGCACAAGGCATGAACTTGAAGAAATGAAAAATTGAAAGATCATAAAATTTCAATCTTACGAACTTGAAGAGGAAAGGGGAAAAACTCTAGCAGGCG
TAGGAGAGCTGACTACGGAGGCAGGCGAGAGGTTAGTATTGACGCACGATGCTGGAAGTTTGAAAAATTTACTGAAATTAGGGCTGGGTATAGTCTTATTAGGGAAATTA
TAATGAATCAGAATAGGTTGGGGTTTCATTTGTGCCAATTTATTGTATAGAATGAATTTTCTTTTCTTAGGCTCAAACCATGAATTTAGGGCTTTGAGAAAGAAAGATAT
AATTTGAGTTGAATATTGAAAGTTCTCTAGAACTGGATTAAGCGTGATCCAATTTGTAATACAAAAATTCTTACATTTCCAAAGTTAAGGAAATAAAAAGAAAACAACTT
CGATCAAATACCAAAAAATTAAGGGAAAAAAAAACGAAAACCGATTTCGAAACTGAGCTTATATTCGATTCGGTTCGAGCTGCACAACGGTGCGGTTTGGTTTTGCATAC
AATTTCTTTTTTAATTTTCAGTTCGGTTTGGGAAACCGTGTCCACCCCTATCGATTGGGGTCGCTGGCTGTGGATCCTGCTTTTGTACGGGTGTTGGGGGAAATGGGAAC
GCTGGGTAGTATTTAAGGATCTTTTGTGTTAGAATTAGTTGTCTTGAATTTTGTGATAGAACTGTAGTTCTTGGGAGGAGAGAGTTAGAGACCACTCCTCTTATTTGGCT
GGGTTTAATGTGCTCTTTTGTTAGTTATTTTCTATCAAAAACATTCCCCTGTTCTGTTCATTTGTGTTCTTTTATTAGTTGTGTTGCCTGTTGCCTTGCAGTTTGGAAAA
CACTTTGGCACCAAATAGTTCGTCGAGTAATTTATCCACAATTGGAATTGGGTACTTGTTAGGAATAATGGGCTTGATTAAAACCCCTACAATCTCAACACCAGCTTCAT
CTTTCTTTCACGAATTAAAATTTTGATCTCATCTTGGCTTGGTTAAAATCCTTACTTGGCTGGATTGTACTAGTTAATTAACATTTCACGAATTAAGCTTTTGATCTAAT
CTTTTGGAAATTGAGGATGTCTGAAGCATTCTCTGGACCAGTTGTTCAATTGTATGGTCACAACTCCTACATGTTTGCAGTTTCCTTGGTTTTGAATATCATCGCATGCT
GTTGGACAACTGTAATATATTGTTGGTCACATTTCCAATGGTGCTTGTTCAAATGCCCTGTGGGAAAAAGAAAAAAATGGGTTTGAGCCAAATTAGATTTTTTAGAAGGA
ACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTACGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCT
AAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCTGCTTG
GCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATACTCGAG
CAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAACAATATAGTAGAGGCAGACTTTGTTTTTGTTTCTTTTGTGAATGTAATGCAACTCTTTGTCAAACTTTGTAT
CAATGTGCAAGTCCCGACTTGCATTCTCTCCCTTTTAGTTACTGTCTGTTTTCCAAGTCCATTTTAATGTACTAATTTCAGATGAAATTCGACAAGTTCGGCT
Protein sequenceShow/hide protein sequence
MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP
AWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK