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IVF0023933 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023933
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCytochrome b6-f complex subunit 7
Genome locationchr01:127163..128126
RNA-Seq ExpressionIVF0023933
SyntenyIVF0023933
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136999.1 uncharacterized protein LOC101210164 [Cucumis sativus]4.51e-7195.2Show/hide
Query:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMS+AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

XP_008454894.1 PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]1.62e-75100Show/hide
Query:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]1.27e-7094.35Show/hide
Query:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLS A+STAAPIAAGSRRQR TNVHYITGLNSFGGLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_023554105.1 uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]4.26e-6992.74Show/hide
Query:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLS  +STAAPIAAGSRRQR  NVHYITGLNSFGGLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_038887487.1 uncharacterized protein LOC120077620 [Benincasa hispida]1.28e-7296.8Show/hide
Query:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLS AM TAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFA I+SSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K4W4 Uncharacterized protein4.5e-5495.2Show/hide
Query:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMS+AAPI+AGSRRQRQTN H+I+GLNSF GLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

A0A1S3C0U4 uncharacterized protein LOC1034952015.6e-57100Show/hide
Query:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1C3G5 uncharacterized protein LOC1110080073.3e-4990.62Show/hide
Query:  MATASATLSTAMSTAAPIAAGSRR-QRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIA
        MATASATLS AMSTAAPIAAGSRR QR  NVHYITGLNSFGGLKAHNNVVSLGLP+C D SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSTAMSTAAPIAAGSRR-QRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIA

Query:  AIINGLVLIGVAVGFVLLRIEASVEEAE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1GND2 uncharacterized protein LOC1114555031.6e-5191.94Show/hide
Query:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        AT SATLS  +STAAPIAAGSRRQR TNVHYITGLNSF GLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

A0A6J1I5T0 uncharacterized protein LOC1114709412.9e-5394.35Show/hide
Query:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLS A+STAAPIAAGSRRQR TNVHYITGLNSFGGLKAHNN+ SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)1.0e-0780.56Show/hide
Query:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE
        NAA EIFRIAA++NGL L+GVA+GFVLLRIEA+VEE
Subjt:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative1.6e-2757.94Show/hide
Query:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI
        A A A +S   S     +  ++++ +  V YITGLNS+GGLKA NN VVS+G P+C +Q FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI
Subjt:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative1.6e-2757.94Show/hide
Query:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI
        A A A +S   S     +  ++++ +  V YITGLNS+GGLKA NN VVS+G P+C +Q FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI
Subjt:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative6.0e-1139.2Show/hide
Query:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        A A A +S   S     +  ++++ +  V YITGLNS+GGLKA NN VVS+G P+C +Q FA +V SLK                               
Subjt:  ATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNN-VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
              G  VGFVLLRIE SVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGCCTCCGCTACCCTCTCGACGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGTCCATTATATTACTGGGCTTAA
CTCCTTTGGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCCCGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGG
GAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTTATTGGAGTGGCTGTG
GGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
CCAATGATTTGAGAAATCTTTAGCAATTCTAATCTGTTTATGAACCACCCAAATTCCTCTTACCTTATCCATTCCCCCCTTCTTCTTTCTCCATACAAACACTCTTTTTT
CCTCATCCAATTCTCATCTCATCACCTTCCACTTTCTCTTCCACTCAGGCATCATTCCAATGGCTACTGCCTCCGCTACCCTCTCGACGGCCATGTCCACCGCCGCCCCC
ATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGTCCATTATATTACTGGGCTTAACTCCTTTGGTGGCTTGAAAGCTCACAACAATGTCGTCTCCTTAGGCCTTCC
CGTTTGTGCTGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCG
GTGAGATTTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTTATTGGAGTGGCTGTGGGGTTTGTTCTTCTTCGGATCGAAGCATCTGTGGAGGAGGCAGAGTGAAAA
GCTACCAAAAATGGTTGATGATGATGAGGATATTGGTCAGTTATCTGAAATTTGTAAGTTAATCTGTTACTTTTACCAGTTATTGTAGAACTCAATTGTTTCCATCAGTC
AAAACAATTGACAAAATTCATTTTGCCTATTTCTATCCCTGCTTTCTCATTACAAAATAATGGCATTGTAGTATATTGTTCATCTGCTTGAAAAAAAATGCATATTCTTG
TAAATTCTTTTTGTGCTGTTTGGATCATGAGAAGAATAAGAAATGAACTTTGCAGGCAATTATTGTAAGATCAACTACTTCTTTGCGGAGACTGTCAAAAAA
Protein sequenceShow/hide protein sequence
MATASATLSTAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNNVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAV
GFVLLRIEASVEEAE