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IVF0023968 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0023968
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHomeobox Hox-B3-like protein
Genome locationchr06:10867573..10868192
RNA-Seq ExpressionIVF0023968
SyntenyIVF0023968
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048497.1 uncharacterized protein E6C27_scaffold61G001100 [Cucumis melo var. makuwa]1.22e-12391.54Show/hide
Query:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
        MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
Subjt:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ

Query:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL
        SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG                +RKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL
Subjt:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL

Query:  G
        G
Subjt:  G

XP_008461547.1 PREDICTED: uncharacterized protein LOC103500118 [Cucumis melo]5.64e-11490.43Show/hide
Query:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
        MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKR+ATVAQ
Subjt:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ

Query:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGE
        SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG                +RKSYAGFEELKGFSTATAKAINGE
Subjt:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGE

XP_011651352.1 uncharacterized protein LOC101205045 [Cucumis sativus]3.33e-11486.14Show/hide
Query:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
        MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKRSATVAQ
Subjt:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ

Query:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL
        SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKN+GGLST SRG                +RKSYAGFEELKGFSTA A AINGENRKGGR+GKTVL
Subjt:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL

Query:  GV
        GV
Subjt:  GV

XP_023524771.1 uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo]1.02e-8973.46Show/hide
Query:  MADKFHHL-----PFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS
        MAD F HL     PFHSID RSLLLHQNSA T H   L LT E FSMERGPRY+AYAELRESKLR RNAMYR  E PEKSTPP KKQ++F+GSETVRKRS
Subjt:  MADKFHHL-----PFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS

Query:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKN--MGGLSTNSRGM----------------RKSYAGFEELKGFSTATAKAINGENRKGG
        ATVAQSVPDFSAVLRKENR+PPPG LSPVMEMTPPGKTWGKN  +GG+S NSRG                 RKSYAGFEELKGFSTA A AINGEN++GG
Subjt:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKN--MGGLSTNSRGM----------------RKSYAGFEELKGFSTATAKAINGENRKGG

Query:  --RKGKTVLGV
          R+GKTVLGV
Subjt:  --RKGKTVLGV

XP_038903179.1 uncharacterized protein LOC120089840 [Benincasa hispida]1.10e-9576.56Show/hide
Query:  MADKFHHL-----PFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS
        MADKF+HL     PFHSID RSLLLHQNSAA D PISL LT EPFSMERGPRY+AYAELRESKLR RNAMYR  E PEKSTPP KKQ+KFL SET+RKRS
Subjt:  MADKFHHL-----PFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS

Query:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGG--
        A VAQSVPDFSAVLRKENRKPPPG LSPVMEMTPPGKTWGK +GGLSTNSRG                +RKSYAGFEE+KGFSTA A AINGENR+GG  
Subjt:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGG--

Query:  RKGKTVLGV
        R+GKTVLG+
Subjt:  RKGKTVLGV

TrEMBL top hitse value%identityAlignment
A0A0A0L9P8 Uncharacterized protein2.5e-8886.14Show/hide
Query:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
        MA KF HLPFHSIDSRSLLLHQNSAA DHPISLHLTPEPFSMERGPRY+AYAELRESKLR RNAMYRHDEHPEKSTPPPKKQ+KFLGSETVRKRSATVAQ
Subjt:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ

Query:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL
        SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKN+GGLST SRG                +RKSYAGFEELKGFSTA A AINGENRKGGR+GKTVL
Subjt:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL

Query:  GV
        GV
Subjt:  GV

A0A1S3CEQ6 uncharacterized protein LOC1035001185.5e-8890.43Show/hide
Query:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
        MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKR+ATVAQ
Subjt:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ

Query:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGE
        SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG                +RKSYAGFEELKGFSTATAKAINGE
Subjt:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGE

A0A5A7U2K6 Uncharacterized protein1.2e-9591.54Show/hide
Query:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
        MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ
Subjt:  MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQ

Query:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL
        SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG                +RKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL
Subjt:  SVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVL

Query:  G
        G
Subjt:  G

A0A6J1GA97 uncharacterized protein LOC1114522045.7e-6973.33Show/hide
Query:  MADKFH-----HLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS
        MAD F      HL FHSID RSLLLHQNS AT H   L LT E FSMERGPRY+AYAELRESKLR RNAMYR  E PEKSTPP KKQ++F+GSETVRKRS
Subjt:  MADKFH-----HLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS

Query:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGK-NMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRK--G
        ATVAQSVPDFSAVLRKENR+PPPG LSPVMEMTPPGKTWGK N+GG+S NSRG                 RKSYAGFEELKGFSTA A AINGEN++  G
Subjt:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGK-NMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRK--G

Query:  GRKGKTVLGV
        GR+GKTVLGV
Subjt:  GRKGKTVLGV

A0A6J1KFU5 uncharacterized protein LOC1114928445.7e-6972.73Show/hide
Query:  MADKFH-----HLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS
        MAD F      HLPFHSID RSLLLHQNS AT H   L LT E FSMERGPRY+AYAELRESKLR RN+MYR  E PEKSTPP KKQ++F+GSETVRKRS
Subjt:  MADKFH-----HLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRS

Query:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGK-NMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRK-GG
        ATVAQSVPDFS+VLRKEN++PPPG LSPVMEMTPPGKTWGK N+GG+S NSRG                 RKSYAGFEELKGFSTA A AINGEN++ GG
Subjt:  ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGK-NMGGLSTNSRG----------------MRKSYAGFEELKGFSTATAKAINGENRK-GG

Query:  RKGKTVLGV
        R+GKTVLGV
Subjt:  RKGKTVLGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67035.1 unknown protein3.0e-0933.16Show/hide
Query:  SLLLHQNSAA-TDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFR---NAMYRHDE------HPEKSTPPPKKQIKFLGSETVRK----RSATVAQSV
        SLL   N  + T   + L +    +  ERG RY  YA LRESKLR +     + + ++        E+    P+K+ +F  +   RK     S+++AQSV
Subjt:  SLLLHQNSAA-TDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFR---NAMYRHDE------HPEKSTPPPKKQIKFLGSETVRK----RSATVAQSV

Query:  PDFSAVLRKENRKPP--PGMLSPVMEMTPPGKTWGKNMGGLSTNSRGMRKSYAGFEELKGFSTATAKAINGENRK--GGRKGKTVLG
        PDFS+++RKENR+PP    +L    E+TPP           S  SR     +AG   ++G  +A+A    G  +   GG  G+T+LG
Subjt:  PDFSAVLRKENRKPP--PGMLSPVMEMTPPGKTWGKNMGGLSTNSRGMRKSYAGFEELKGFSTATAKAINGENRK--GGRKGKTVLG

AT1G67035.2 unknown protein2.3e-1435.21Show/hide
Query:  SLLLHQNSAA-TDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFR---NAMYRHDE------HPEKSTPPPKKQIKFLGSETVRK----RSATVAQSV
        SLL   N  + T   + L +    +  ERG RY  YA LRESKLR +     + + ++        E+    P+K+ +F  +   RK     S+++AQSV
Subjt:  SLLLHQNSAA-TDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFR---NAMYRHDE------HPEKSTPPPKKQIKFLGSETVRK----RSATVAQSV

Query:  PDFSAVLRKENRKPP--PGMLSPVMEMTPPGKT-------WGKNMGGLSTNSRG-------MRKSYAGFEELKGFSTATAKAINGENRK-------GGRK
        PDFS+++RKENR+PP    +L    E+TPP           G  + G  + S G       MRKSYA  ++LK  S A A AING   K       GGRK
Subjt:  PDFSAVLRKENRKPP--PGMLSPVMEMTPPGKT-------WGKNMGGLSTNSRG-------MRKSYAGFEELKGFSTATAKAINGENRK-------GGRK

Query:  -------GKTVLG
               G+T+LG
Subjt:  -------GKTVLG

AT5G38300.1 unknown protein1.1e-1635.02Show/hide
Query:  FHSIDSRSLLLHQNSAATDHPISLHLTPEPFS-MERGPRYKAYAELRESKLRFRNAMYRH-DEHPEKSTPPPKKQIKFLGS-------------------
        F S+D  SL+L QNS    H + L L  + FS  ERGPRY  Y+ LRESKLR +    +  +E  E   P  KKQ++F G+                   
Subjt:  FHSIDSRSLLLHQNSAATDHPISLHLTPEPFS-MERGPRYKAYAELRESKLRFRNAMYRH-DEHPEKSTPPPKKQIKFLGS-------------------

Query:  ---------------ETVRKRS------------ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLST---------------NSR
                       E V+K+S            +++AQSVPDFSAV+RKENR+P       +  +TPP  T     GG+ T                S+
Subjt:  ---------------ETVRKRS------------ATVAQSVPDFSAVLRKENRKPPPGMLSPVMEMTPPGKTWGKNMGGLST---------------NSR

Query:  GM------RKSYAGFEELKGFSTATAKAINGENRKGG
        GM      RKSYA  E+LK  S A A AING    GG
Subjt:  GM------RKSYAGFEELKGFSTATAKAINGENRKGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACAAATTCCACCACCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCACCGACCACCCCATTTCTCTCCACCTCACACC
TGAGCCTTTCTCCATGGAAAGAGGCCCAAGGTACAAAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTCAGAAACGCCATGTATCGCCACGATGAACACCCAGAGA
AGTCCACCCCCCCGCCCAAGAAGCAAATTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGA
AAGGAGAATAGAAAGCCGCCGCCGGGAATGTTGTCGCCAGTGATGGAGATGACGCCCCCAGGGAAGACGTGGGGGAAGAATATGGGGGGATTGTCGACGAATTCGAGGGG
GATGAGGAAAAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACCGCGACGGCCAAAGCTATTAATGGTGAAAATAGGAAAGGGGGAAGGAAAGGAAAAACTGTAT
TGGGAGTAGACAAGTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACAAATTCCACCACCTCCCCTTCCACTCCATCGACTCCAGATCCCTCCTCCTCCACCAGAACTCCGCCGCCACCGACCACCCCATTTCTCTCCACCTCACACC
TGAGCCTTTCTCCATGGAAAGAGGCCCAAGGTACAAAGCCTACGCAGAGCTCAGAGAATCCAAGCTCCGCTTCAGAAACGCCATGTATCGCCACGATGAACACCCAGAGA
AGTCCACCCCCCCGCCCAAGAAGCAAATTAAATTTCTGGGTTCGGAGACTGTAAGGAAAAGGTCCGCTACGGTGGCGCAATCGGTGCCGGATTTCTCTGCAGTGCTAAGA
AAGGAGAATAGAAAGCCGCCGCCGGGAATGTTGTCGCCAGTGATGGAGATGACGCCCCCAGGGAAGACGTGGGGGAAGAATATGGGGGGATTGTCGACGAATTCGAGGGG
GATGAGGAAAAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACCGCGACGGCCAAAGCTATTAATGGTGAAAATAGGAAAGGGGGAAGGAAAGGAAAAACTGTAT
TGGGAGTAGACAAGTTTAAATGA
Protein sequenceShow/hide protein sequence
MADKFHHLPFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELRESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQSVPDFSAVLR
KENRKPPPGMLSPVMEMTPPGKTWGKNMGGLSTNSRGMRKSYAGFEELKGFSTATAKAINGENRKGGRKGKTVLGVDKFK