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IVF0024007 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024007
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:7619277..7626126
RNA-Seq ExpressionIVF0024007
SyntenyIVF0024007
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055819.1 carboxypeptidase Y-like [Cucumis melo var. makuwa]9.72e-0461.76Show/hide
Query:  IAEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYG
        +AE G D+R ENLS GED+D    +GF PSLTYG
Subjt:  IAEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYG
KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]3.28e-1654.32Show/hide
Query:  MVNEKVISLRLRECVSITPPMIA-----EIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVVGVKY
        M+N+KVI LRL+ECVS+ P  +      E G+D R ENLS GEDMD G  +GF P+LT+G WLYV+I  ++E+VTVV  +Y
Subjt:  MVNEKVISLRLRECVSITPPMIA-----EIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVVGVKY
TYK25868.1 hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa]6.48e-0858Show/hide
Query:  AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVV
        A+ GH+RR ENLS GEDMD G  +G  PSL +G WLYV+I  +++VVT+V
Subjt:  AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVV
XP_031740114.1 uncharacterized protein LOC105435219 [Cucumis sativus]1.18e-0658.14Show/hide
Query:  AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYIEVE
        AE   D+R ENLS  EDMD G  +GF PSLT+ GWLYV+I  +
Subjt:  AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYIEVE
TrEMBL top hitse value%identityAlignment
A0A5A7UUF7 Retrotransposon protein1.5e-1254.32Show/hide
Query:  MVNEKVISLRLRECVSITPPMI-----AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVVGVKY
        M+N+KVI LRL+ECVS+ P  +      E G+D R ENLS GEDMD G  +GF P+LT+G WLYV+I  ++E+VTVV  +Y
Subjt:  MVNEKVISLRLRECVSITPPMI-----AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVVGVKY
A0A5D3DQP8 Uncharacterized protein6.1e-0658Show/hide
Query:  AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVV
        A+ GH+RR ENLS GEDMD G  +G  PSL +G WLYV+I  +++VVT+V
Subjt:  AEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYI--EVEVVTVV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAACGAGAAGGTGATTTCCCTAAGGCTACGTGAATGTGTTTCCATAACGCCACCTATGATCGCTGAAATAGGCCATGATCGGAGATTCGAGAACTTGAGCCGAGG
TGAGGACATGGATGAAGGATGTGATTTTGGCTTTTGGCCTAGTTTAACCTATGGTGGGTGGCTCTATGTGTACATAGAAGTGGAGGTTGTTACTGTGGTAGGTGTTAAGT
ATGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAACGAGAAGGTGATTTCCCTAAGGCTACGTGAATGTGTTTCCATAACGCCACCTATGATCGCTGAAATAGGCCATGATCGGAGATTCGAGAACTTGAGCCGAGG
TGAGGACATGGATGAAGGATGTGATTTTGGCTTTTGGCCTAGTTTAACCTATGGTGGGTGGCTCTATGTGTACATAGAAGTGGAGGTTGTTACTGTGGTAGGTGTTAAGT
ATGCGTGA
Protein sequenceShow/hide protein sequence
MVNEKVISLRLRECVSITPPMIAEIGHDRRFENLSRGEDMDEGCDFGFWPSLTYGGWLYVYIEVEVVTVVGVKYA