; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024009 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024009
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr11:7865460..7865810
RNA-Seq ExpressionIVF0024009
SyntenyIVF0024009
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0005488 - binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066418.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]4.16e-77100Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSIKTIQIWVQSEAKD
        KSIKTIQIWVQSEAKD
Subjt:  KSIKTIQIWVQSEAKD

KAA0066518.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.75e-2652.48Show/hide
Query:  GEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQKS
        GE+ ++L+ DP+L K E SLKT+ KTWD EDQ FL+E    E+E     D E   K DE+DLPMIK+L ++Y+  F  PK LPPKR IDHHIL +  Q  
Subjt:  GEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQKS

Query:  I
        I
Subjt:  I

TYJ98046.1 peroxidase 64 [Cucumis melo var. makuwa]1.11e-2654.37Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        M G   +IL+GDPSL K E SLKTI+KTW+ EDQ FLIEF  +EIE  + +++E EE+ +E +LPMI+ L  +    F  PKGLPPKR +DH IL  EGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSI
          I
Subjt:  KSI

TYK22651.1 reverse transcriptase [Cucumis melo var. makuwa]8.14e-2955.34Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        MAG   ++L+GDPSLTK+E SLKTI+KTW+ EDQ FL+EF  +EI   T  +NE EE+ ++  LPM++ L  +Y   F TPKGLPPKR +DH I+ +EGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSI
        K I
Subjt:  KSI

TYK23088.1 pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]1.23e-2650.49Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        MAG+  +IL+GD S TK E SLKTI+KTW+ EDQ FL+EF N+EI+     +++ EE+ +E +LPMI+ L +++   F  PK LPP+RV+DH IL ++ Q
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSI
        K I
Subjt:  KSI

TrEMBL top hitse value%identityAlignment
A0A5A7V4D8 Disease resistance protein2.5e-2255.34Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        M G   +IL+GDPSLTK E SLKTI+KTW+ EDQ FLIEF  +EIE  + +++E EE+ +E +LPMI+ L  +    F  PKGLPPKR +DH IL  EGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSI
          I
Subjt:  KSI

A0A5D3BG24 Peroxidase 649.3e-2254.37Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        M G   +IL+GDPSL K E SLKTI+KTW+ EDQ FLIEF  +EIE  + +++E EE+ +E +LPMI+ L  +    F  PKGLPPKR +DH IL  EGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSI
          I
Subjt:  KSI

A0A5D3BNM8 Ty3-gypsy retroelement transposase1.6e-58100Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSIKTIQIWVQSEAKD
        KSIKTIQIWVQSEAKD
Subjt:  KSIKTIQIWVQSEAKD

A0A5D3DG25 Reverse transcriptase4.5e-2455.34Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        MAG   ++L+GDPSLTK+E SLKTI+KTW+ EDQ FL+EF  +EI   T  +NE EE+ ++  LPM++ L  +Y   F TPKGLPPKR +DH I+ +EGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSI
        K I
Subjt:  KSI

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein2.5e-2255.34Show/hide
Query:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ
        M G   +IL+GDPSLTK E SLKTI+KTW+ EDQ FLIEF  +EIE  + +++E EE+ +E +LPMI+ L  +    F  PKGLPPKR +DH IL  EGQ
Subjt:  MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQ

Query:  KSI
          I
Subjt:  KSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAGAACAACCAATCATCCTACAAGGAGATCCATCCTTAACTAAAGTGGAGGGCTCACTCAAAACTATCACAAAAACATGGGACCTTGAAGATCAAGATTTCCT
AATTGAATTCCATAATTTAGAGATTGAAGGGGCAACCACCATGGACAATGAGGTGGAAGAGAAAGAGGACGAAGAGGACTTACCAATGATTAAGACCTTGTCGAGGCAGT
ATGATAAATTTTTTTCCACACCAAAAGGGTTGCCCCCGAAGAGAGTTATTGACCATCACATTCTTAAGATAGAGGGACAAAAATCGATCAAGACTATACAAATATGGGTA
CAATCAGAAGCCAAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGAGAACAACCAATCATCCTACAAGGAGATCCATCCTTAACTAAAGTGGAGGGCTCACTCAAAACTATCACAAAAACATGGGACCTTGAAGATCAAGATTTCCT
AATTGAATTCCATAATTTAGAGATTGAAGGGGCAACCACCATGGACAATGAGGTGGAAGAGAAAGAGGACGAAGAGGACTTACCAATGATTAAGACCTTGTCGAGGCAGT
ATGATAAATTTTTTTCCACACCAAAAGGGTTGCCCCCGAAGAGAGTTATTGACCATCACATTCTTAAGATAGAGGGACAAAAATCGATCAAGACTATACAAATATGGGTA
CAATCAGAAGCCAAAGATTAA
Protein sequenceShow/hide protein sequence
MAGEQPIILQGDPSLTKVEGSLKTITKTWDLEDQDFLIEFHNLEIEGATTMDNEVEEKEDEEDLPMIKTLSRQYDKFFSTPKGLPPKRVIDHHILKIEGQKSIKTIQIWV
QSEAKD